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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS20340 and RALBFv3_RS20345 are separated by 263 nucleotides
RALBFv3_RS20345 and RALBFv3_RS24500 are separated by 188 nucleotides
RALBFv3_RS24500 and RALBFv3_RS20350 are separated by 199 nucleotides
RALBFv3_RS20350 and RALBFv3_RS20355 are separated by 89 nucleotides
RALBFv3_RS20340: RALBFv3_RS20340 - type III effector gala6 protein, at 1,256,112 to 1,259,273
_RS20340
RALBFv3_RS20345: RALBFv3_RS20345 - RND transporter, at 1,259,537 to 1,260,991
_RS20345
RALBFv3_RS24500: RALBFv3_RS24500 - DUF3309 domain-containing protein, at 1,261,180 to 1,261,335
_RS24500
RALBFv3_RS20350: RALBFv3_RS20350 - DUF2520 domain-containing protein, at 1,261,535 to 1,262,419
_RS20350
RALBFv3_RS20355: RALBFv3_RS20355 - MFS transporter, at 1,262,509 to 1,263,732
_RS20355
Group
Condition
RALBFv3
_RS20340
RALBFv3
_RS20345
RALBFv3
_RS24500
RALBFv3
_RS20350
RALBFv3
_RS20355
stress
SMSA with Ralstonia_antibiotic_mix
+0.1
-0.6
-0.2
-0.4
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.0
+0.1
-0.5
-0.5
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.1
-0.1
+0.2
-0.9
+0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.1
-0.5
+0.4
-0.4
-0.1
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.4
-0.8
+0.4
-0.3
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.4
+0.5
-0.6
+0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.2
+0.1
-0.4
+0.5
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.3
+0.1
-0.6
+0.8
-0.0
in planta
tomato xylem local (total stem)
+0.4
-0.4
+0.1
-0.4
+0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.4
+0.0
+0.5
-0.7
+0.0
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.1
+0.0
+0.5
-0.5
+0.2
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.5
-0.5
+0.1
+0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.2
+0.4
+0.4
-0.5
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
-0.4
+0.5
-0.1
+0.2
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.0
+0.7
-0.7
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
-0.6
+0.6
+0.1
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.4
+0.6
-0.2
+0.0
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
-0.2
+1.1
-0.6
+0.6
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.2
-0.1
+0.0
+0.5
+0.4
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.2
+0.6
-0.1
+0.1
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.1
+1.2
-0.3
+0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.8
+0.3
-0.2
+0.1
+0.1
in planta
tomato xylem local (total stem)
+0.3
+0.7
+0.5
-0.3
+0.0
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.2
+0.3
+0.9
+0.2
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.3
+0.5
+1.0
-0.1
+0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.1
+0.6
+0.5
+0.3
+0.0
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.3
+0.6
+0.0
+0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.3
+0.5
+0.4
+0.2
+0.0
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.4
+1.1
+0.0
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.1
+0.4
+1.2
+0.4
+0.2
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RALBFv3_RS20340
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RALBFv3_RS20345
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RALBFv3_RS24500
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RALBFv3_RS20350
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RALBFv3_RS20355
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