Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS18620 and RALBFv3_RS18625 are separated by 45 nucleotidesRALBFv3_RS18625 and RALBFv3_RS24390 are separated by 99 nucleotidesRALBFv3_RS24390 and RALBFv3_RS18635 overlap by 77 nucleotidesRALBFv3_RS18635 and RALBFv3_RS18640 are separated by 88 nucleotides RALBFv3_RS18620: RALBFv3_RS18620 - alpha/beta hydrolase, at 712,032 to 713,018 _RS18620 RALBFv3_RS18625: RALBFv3_RS18625 - heavy metal-responsive transcriptional regulator, at 713,064 to 713,441 _RS18625 RALBFv3_RS24390: RALBFv3_RS24390 - NAD(P)-dependent oxidoreductase, at 713,541 to 714,458 _RS24390 RALBFv3_RS18635: RALBFv3_RS18635 - AsnC family transcriptional regulator, at 714,382 to 714,690 _RS18635 RALBFv3_RS18640: RALBFv3_RS18640 - IS5/IS1182 family transposase, at 714,779 to 715,127 _RS18640
Group Condition RALBFv3_RS18620 RALBFv3_RS18625 RALBFv3_RS24390 RALBFv3_RS18635 RALBFv3_RS18640
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.2 -0.2 -0.0 N.D. -1.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.0 +0.0 -0.0 N.D. -1.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 -0.2 +0.1 N.D. -1.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.0 -0.8 +0.1 N.D. -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.0 -0.1 -0.1 N.D. -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.3 +0.2 N.D. -1.2
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.0 -0.2 +0.0 N.D. -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.2 -0.1 +0.2 N.D. -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.2 +0.1 N.D. -0.6
in planta tomato xylem local (total stem) +0.5 -0.4 +0.2 N.D. -1.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 -0.2 -0.1 N.D. -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.2 +0.2 N.D. -0.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.1 +0.1 N.D. -0.8
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.4 +0.1 N.D. -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.5 +0.2 N.D. -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 -0.2 +0.2 N.D. -0.8
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 -0.2 +0.3 N.D. -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.1 +0.1 N.D. -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.1 +0.3 N.D. -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.2 +0.5 N.D. -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.3 +0.3 N.D. +0.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.2 -0.1 N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.2 +0.4 N.D. -0.4
cpg no stress control CPG no stress control +0.2 +0.1 +0.2 N.D. -0.5
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.3 -0.1 N.D. +0.0
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.1 -0.3 N.D. +0.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.3 +0.1 N.D. -0.5
in planta tomato xylem local (total stem) +0.4 +0.0 +0.3 N.D. +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 +0.4 +0.1 N.D. +0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.2 +0.3 +0.1 N.D. +0.7
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