Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS23470 and RALBFv3_RS23475 are separated by 149 nucleotidesRALBFv3_RS23475 and RALBFv3_RS23480 are separated by 97 nucleotidesRALBFv3_RS23480 and RALBFv3_RS23485 are separated by 100 nucleotidesRALBFv3_RS23485 and RALBFv3_RS23490 are separated by 42 nucleotides RALBFv3_RS23470: RALBFv3_RS23470 - hypothetical protein, at 2,045,929 to 2,046,399 _RS23470 RALBFv3_RS23475: RALBFv3_RS23475 - AraC family transcriptional regulator, at 2,046,549 to 2,047,352 _RS23475 RALBFv3_RS23480: RALBFv3_RS23480 - EamA/RhaT family transporter, at 2,047,450 to 2,048,343 _RS23480 RALBFv3_RS23485: RALBFv3_RS23485 - LacI family transcriptional regulator, at 2,048,444 to 2,049,484 _RS23485 RALBFv3_RS23490: RALBFv3_RS23490 - NAD(P)-dependent oxidoreductase, at 2,049,527 to 2,050,444 _RS23490
Group Condition RALBFv3_RS23470 RALBFv3_RS23475 RALBFv3_RS23480 RALBFv3_RS23485 RALBFv3_RS23490
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 -0.4 +0.0 -0.6 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 -0.2 -0.2 -0.9 +0.4
m63_quarter_strength M63_quarter_strength +0.0 +0.2 -0.1 +0.6 -1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.0 -0.1 +0.1 +0.0 -0.8
m63_quarter_strength M63_quarter_strength +0.1 +0.1 -0.1 +1.2 -1.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -0.1 -0.5 +0.1 -0.4
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.2 -0.2 -0.2 +0.3 -0.6
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -0.2 +0.1 -0.4 +0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.2 -0.1 -0.3 +0.7 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.4 -0.3 +0.4 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.2 -0.1 +0.2 -0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.3 -0.2 +0.4 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.4 +0.1 +0.2 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.4 -0.4 +0.4 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.2 -0.3 +0.3 -0.3
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.8 -0.3 +0.6 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.5 -0.1 +0.2 -0.4
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.5 +0.1 -0.1 +0.2 -0.3
in planta tomato xylem local (total stem) +0.4 +0.3 -0.2 +0.6 -0.7
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.3 -0.3 +0.2 -0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 -0.4 +0.7 -0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.3 -0.1 +0.4 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 +0.1 -0.0 +0.5 -0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.3 +0.2 -0.4 +0.7 -0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.3 -0.2 +0.1 +0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.2 +0.3 -0.1 +1.0 -0.4
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 -0.1 +0.1 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.2 -0.0 +0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.2 +0.1 +0.3 +0.4
in planta tomato xylem local (total stem) +0.8 +0.2 +0.4 +0.6 -0.4
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