Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS23260 and RALBFv3_RS23265 are separated by 78 nucleotidesRALBFv3_RS23265 and RALBFv3_RS23270 are separated by 1449 nucleotidesRALBFv3_RS23270 and RALBFv3_RS23275 are separated by 287 nucleotidesRALBFv3_RS23275 and RALBFv3_RS24805 are separated by 305 nucleotides RALBFv3_RS23260: RALBFv3_RS23260 - cold-shock protein, at 2,001,272 to 2,001,475 _RS23260 RALBFv3_RS23265: RALBFv3_RS23265 - replication protein RepA, at 2,001,554 to 2,002,623 _RS23265 RALBFv3_RS23270: RALBFv3_RS23270 - NCS2 family permease, at 2,004,073 to 2,005,377 _RS23270 RALBFv3_RS23275: RALBFv3_RS23275 - hypothetical protein, at 2,005,665 to 2,006,963 _RS23275 RALBFv3_RS24805: RALBFv3_RS24805 - hypothetical protein, at 2,007,269 to 2,007,472 _RS24805
Group Condition RALBFv3_RS23260 RALBFv3_RS23265 RALBFv3_RS23270 RALBFv3_RS23275 RALBFv3_RS24805
cpg no stress control CPG no stress control N.D. N.D. +0.1 -2.8 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. +0.2 -2.0 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. -0.1 -1.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.0 -1.7 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. N.D. -0.2 -1.5 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 -1.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.2 -1.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.0 -1.4 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -1.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. +0.0 -1.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. -0.1 -1.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -1.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. +0.0 -1.1 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. N.D. +0.0 -1.0 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 -0.7 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. +0.1 -1.0 N.D.
in planta tomato xylem local (total stem) N.D. N.D. -0.1 -0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. -0.0 -0.8 N.D.
m63_quarter_strength M63_quarter_strength N.D. N.D. +0.1 -1.0 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. N.D. -0.1 -0.8 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. N.D. -0.1 -0.7 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.1 -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. +0.2 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.3 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.3 -0.5 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. -0.4 +0.6 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. N.D. -0.3 +0.6 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. -0.2 +0.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.1 +0.7 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. N.D. +0.0 +1.1 N.D.
remove
RALBFv3_RS23260
plot		 remove
RALBFv3_RS23265
plot		 remove
RALBFv3_RS23270		 remove
RALBFv3_RS23275
plot		 remove
RALBFv3_RS24805
plot