Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS22420 and RALBFv3_RS22425 are separated by 11 nucleotidesRALBFv3_RS22425 and RALBFv3_RS22430 are separated by 135 nucleotidesRALBFv3_RS22430 and RALBFv3_RS22435 are separated by 210 nucleotidesRALBFv3_RS22435 and RALBFv3_RS22440 are separated by 33 nucleotides RALBFv3_RS22420: RALBFv3_RS22420 - oxidoreductase, at 1,785,381 to 1,786,334 _RS22420 RALBFv3_RS22425: RALBFv3_RS22425 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 1,786,346 to 1,787,374 _RS22425 RALBFv3_RS22430: RALBFv3_RS22430 - LysR family transcriptional regulator, at 1,787,510 to 1,788,424 _RS22430 RALBFv3_RS22435: RALBFv3_RS22435 - two-component sensor histidine kinase, at 1,788,635 to 1,790,020 _RS22435 RALBFv3_RS22440: RALBFv3_RS22440 - hypothetical protein, at 1,790,054 to 1,790,461 _RS22440
Group Condition RALBFv3_RS22420 RALBFv3_RS22425 RALBFv3_RS22430 RALBFv3_RS22435 RALBFv3_RS22440
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.5 +0.1 +0.1 -1.6
in planta tomato xylem local (total stem) -0.2 -0.3 +0.1 +0.8 -2.0
m63_quarter_strength M63_quarter_strength -0.2 -0.6 +0.2 -0.0 -0.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.6 +0.5 +0.0 -0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 -0.4 +0.3 +0.2 -1.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.0 -0.6 +0.3 +0.1 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 +0.1 +0.4 +0.0 -0.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 +0.1 -0.1 +0.5 -0.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 -0.3 -0.5 +0.1 +0.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.2 +0.5 +0.3 -0.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 +0.1 +0.3 +0.1 -0.7
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 -0.5 +0.7 +0.5 -1.0
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -0.6 +0.6 +0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.0 +0.4 +0.5 -0.6
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.2 +0.9 +0.3 -1.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.4 -0.4 +0.7 -0.1 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 +0.3 -0.1 +0.1 -0.5
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -0.2 +0.7 +0.2 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.1 +0.6 +0.3 -0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 -0.2 +0.9 -0.0 -0.8
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.4 +0.6 +0.3 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -0.3 -0.1 +0.1 +0.8
in planta tomato xylem local (total stem) -0.0 +0.2 +0.5 +0.3 -0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.4 -0.6 +0.7 +0.4 -0.3
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.1 +0.5 +0.9 -0.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -0.0 -0.4 +0.1 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.4 +0.1 +0.6 +0.6
in planta tomato xylem local (total stem) +0.5 +0.2 +1.1 +0.3 -1.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.0 +0.9 +0.4 +0.8
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.2 +0.3 +0.5 +1.0
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RALBFv3_RS22420
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RALBFv3_RS22430
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RALBFv3_RS22435
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RALBFv3_RS22440
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