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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS22220 and RALBFv3_RS22225 are separated by 35 nucleotides
RALBFv3_RS22225 and RALBFv3_RS22230 are separated by 278 nucleotides
RALBFv3_RS22230 and RALBFv3_RS22235 are separated by 348 nucleotides
RALBFv3_RS22235 and RALBFv3_RS22240 are separated by 39 nucleotides
RALBFv3_RS22220: RALBFv3_RS22220 - methyl-accepting chemotaxis protein, at 1,727,162 to 1,728,751
_RS22220
RALBFv3_RS22225: RALBFv3_RS22225 - sensor domain-containing diguanylate cyclase, at 1,728,787 to 1,732,323
_RS22225
RALBFv3_RS22230: RALBFv3_RS22230 - histidine kinase, at 1,732,602 to 1,735,052
_RS22230
RALBFv3_RS22235: RALBFv3_RS22235 - iron transporter FeoA, at 1,735,401 to 1,735,712
_RS22235
RALBFv3_RS22240: RALBFv3_RS22240 - ferrous iron transport protein B, at 1,735,752 to 1,737,617
_RS22240
Group
Condition
RALBFv3
_RS22220
RALBFv3
_RS22225
RALBFv3
_RS22230
RALBFv3
_RS22235
RALBFv3
_RS22240
cpg
CPG
-0.1
-1.7
+0.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
-1.1
+0.0
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
-1.1
+0.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.5
-0.9
-0.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.5
-1.0
+0.1
N.D.
N.D.
cpg
CPG
+0.1
-1.3
+0.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.4
-1.0
+0.3
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.6
+0.0
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.8
+0.2
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
-0.8
+0.1
N.D.
N.D.
in planta
tomato xylem local (total stem)
-0.7
+0.1
-0.3
N.D.
N.D.
cpg
CPG
+0.1
-1.0
+0.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.3
-0.9
+0.5
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.5
+0.3
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-0.4
+0.3
N.D.
N.D.
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
-0.4
+0.3
N.D.
N.D.
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.7
+0.4
+0.1
N.D.
N.D.
in planta
tomato xylem local (total stem)
-0.4
-0.2
+0.4
N.D.
N.D.
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.1
+0.5
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.6
+0.3
+0.2
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.4
+0.4
-0.1
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.4
+0.5
+0.0
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.5
+0.6
+0.2
N.D.
N.D.
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.3
+0.4
+0.4
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.2
+0.6
-0.2
N.D.
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.2
+0.6
+0.2
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.3
+0.3
+0.3
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.5
+0.5
+0.0
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.3
+0.7
+0.2
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.1
+1.2
+0.3
N.D.
N.D.
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