Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS24685 and RALBFv3_RS24690 are separated by 398 nucleotidesRALBFv3_RS24690 and RALBFv3_RS21985 are separated by 39 nucleotidesRALBFv3_RS21985 and RALBFv3_RS21990 overlap by 4 nucleotidesRALBFv3_RS21990 and RALBFv3_RS21995 overlap by 29 nucleotides RALBFv3_RS24685: RALBFv3_RS24685 - hypothetical protein, at 1,668,186 to 1,669,058 _RS24685 RALBFv3_RS24690: RALBFv3_RS24690 - hypothetical protein, at 1,669,457 to 1,669,789 _RS24690 RALBFv3_RS21985: RALBFv3_RS21985 - type I secretion system permease/ATPase, at 1,669,829 to 1,672,003 _RS21985 RALBFv3_RS21990: RALBFv3_RS21990 - HlyD family type I secretion periplasmic adaptor subunit, at 1,672,000 to 1,673,343 _RS21990 RALBFv3_RS21995: RALBFv3_RS21995 - TolC family protein, at 1,673,315 to 1,674,799 _RS21995
Group Condition RALBFv3_RS24685 RALBFv3_RS24690 RALBFv3_RS21985 RALBFv3_RS21990 RALBFv3_RS21995
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 +0.4 -0.1 -0.6 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.1 +0.1 -0.6 +0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.2 -0.2 -0.6 +0.5
cpg CPG -0.5 +0.3 -0.3 -0.1 +0.3
in planta tomato xylem local (total stem) -1.0 +0.6 +0.1 -0.2 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 +0.5 +0.0 -0.4 +0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 +0.4 -0.1 -0.2 +0.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 -0.3 +0.1 +0.0 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.5 +0.5 +0.1 -0.5 +0.6
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 +0.1 +0.0 -0.4 +0.8
in planta tomato xylem local (total stem) -0.5 -0.2 +0.2 -0.4 +1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.5 -0.0 -0.5 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.3 -0.1 -0.3 +1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.4 +0.1 -0.2 +0.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 +0.5 -0.2 -0.2 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 +0.4 +0.0 -0.0 +0.8
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.7 +0.4 -0.1 -0.2 +1.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.5 +0.0 -0.2 +0.9
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.5 +0.1 -0.0 +0.5
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.4 +0.1 -0.3 +0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 +0.4 +0.0 -0.2 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.4 +0.0 -0.3 +0.7
in planta tomato xylem local (total stem) +0.3 +0.4 -0.3 +0.2 +0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 +0.5 +0.1 -0.2 +0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.3 +0.3 -0.0 -0.2 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.4 +0.1 -0.2 +0.9
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.6 +0.4 +0.4 -0.4 +0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.6 +0.3 +0.2 -0.4 +0.9
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 +0.6 +0.0 -0.5 +0.8
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.5 -0.2 -0.4 +1.0
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RALBFv3_RS24685
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RALBFv3_RS24690
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RALBFv3_RS21995
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