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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS21880 and RALBFv3_RS21885 are separated by 67 nucleotides
RALBFv3_RS21885 and RALBFv3_RS21890 are separated by 46 nucleotides
RALBFv3_RS21890 and RALBFv3_RS21895 overlap by 4 nucleotides
RALBFv3_RS21895 and RALBFv3_RS21900 are separated by 98 nucleotides
RALBFv3_RS21880: RALBFv3_RS21880 - nuclear transport factor 2 family protein, at 1,633,211 to 1,633,654
_RS21880
RALBFv3_RS21885: RALBFv3_RS21885 - nitronate monooxygenase, at 1,633,722 to 1,634,729
_RS21885
RALBFv3_RS21890: RALBFv3_RS21890 - sensor histidine kinase, at 1,634,776 to 1,635,858
_RS21890
RALBFv3_RS21895: RALBFv3_RS21895 - DNA-binding response regulator, at 1,635,855 to 1,636,625
_RS21895
RALBFv3_RS21900: RALBFv3_RS21900 - MexC family multidrug efflux RND transporter periplasmic adaptor subunit, at 1,636,724 to 1,637,881
_RS21900
Group
Condition
RALBFv3
_RS21880
RALBFv3
_RS21885
RALBFv3
_RS21890
RALBFv3
_RS21895
RALBFv3
_RS21900
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-1.0
+0.2
-0.3
-0.8
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.2
-0.2
-0.7
-0.1
-0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.0
+0.5
-1.4
-0.1
-0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.2
-0.2
-0.8
-0.4
-0.5
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.0
+0.1
-0.1
-0.5
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.3
-0.0
-0.6
-0.5
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.6
+0.2
-0.2
-0.5
-0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.7
+0.3
-0.4
+0.1
-0.3
in planta
tomato xylem local (total stem)
-0.2
-0.1
-0.2
-0.9
+0.4
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.3
+0.3
-0.2
-1.2
+0.6
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.9
+0.5
-0.5
-0.3
+0.5
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
+0.1
-0.4
-0.3
+0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.5
+0.2
-0.8
+0.2
+0.3
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
+0.5
-0.1
-0.6
+0.2
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.0
+0.5
-0.4
-0.6
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.7
+0.1
-0.4
+0.5
+0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.5
-0.5
-0.1
+0.4
-0.2
in planta
tomato xylem local (total stem)
-0.7
-0.0
+0.3
-0.8
+1.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.8
+0.4
-0.3
+0.3
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.4
+0.4
-0.8
+0.8
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.4
+0.5
-0.4
-0.7
+0.5
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
+0.6
-0.1
-0.1
+0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
+0.4
-0.3
+0.4
+0.2
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.6
+0.0
+0.3
-0.1
+0.8
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.3
+0.6
-0.2
-0.3
+0.6
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.0
+0.7
+0.4
-0.4
+0.2
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.4
+0.9
-0.3
-0.3
+0.8
in planta
tomato xylem local (total stem)
+0.0
+0.4
-0.3
-0.2
+0.8
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.3
+0.6
+0.7
-0.4
+0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.3
+0.7
+0.3
-0.3
+0.2
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RALBFv3_RS21890
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RALBFv3_RS21895
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RALBFv3_RS21900
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