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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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500 nt
RALBFv3_RS21665 and RALBFv3_RS21670 are separated by 10 nucleotides
RALBFv3_RS21670 and RALBFv3_RS21675 are separated by 27 nucleotides
RALBFv3_RS21675 and RALBFv3_RS24660 are separated by 110 nucleotides
RALBFv3_RS24660 and RALBFv3_RS21680 are separated by 263 nucleotides
RALBFv3_RS21665: RALBFv3_RS21665 - flagellar biosynthetic protein FliP, at 1,588,180 to 1,588,929
_RS21665
RALBFv3_RS21670: RALBFv3_RS21670 - flagellar biosynthetic protein FliQ, at 1,588,940 to 1,589,209
_RS21670
RALBFv3_RS21675: RALBFv3_RS21675 - flagellar biosynthetic protein FliR, at 1,589,237 to 1,590,025
_RS21675
RALBFv3_RS24660: RALBFv3_RS24660 - hypothetical protein, at 1,590,136 to 1,590,504
_RS24660
RALBFv3_RS21680: RALBFv3_RS21680 - NAD(P)/FAD-dependent oxidoreductase, at 1,590,768 to 1,592,027
_RS21680
Group
Condition
RALBFv3
_RS21665
RALBFv3
_RS21670
RALBFv3
_RS21675
RALBFv3
_RS24660
RALBFv3
_RS21680
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.8
N.D.
-0.9
-0.7
+0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
N.D.
-0.4
-1.0
-0.1
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
N.D.
-0.4
-0.5
-0.2
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
N.D.
+0.0
-0.8
-0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.1
N.D.
-0.2
-1.2
-0.1
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
N.D.
-0.5
-0.9
+0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.3
N.D.
-0.9
-0.0
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
N.D.
+0.1
-1.1
-0.5
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
N.D.
-1.1
-0.5
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
N.D.
-0.4
-0.8
-0.4
in planta
tomato xylem local (total stem)
+0.3
N.D.
-1.0
-0.6
+0.1
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.3
N.D.
+0.1
-0.4
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
N.D.
+0.1
-1.0
-0.1
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.6
N.D.
-0.4
+0.2
-0.1
in planta
tomato xylem local (total stem)
-0.1
N.D.
-0.4
-0.7
+0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.2
N.D.
+0.5
-0.8
+0.0
in planta
tomato xylem local (total stem)
+0.4
N.D.
-0.1
-0.7
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.7
N.D.
-0.4
-0.5
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.4
N.D.
-0.5
-0.3
+0.1
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.7
N.D.
+0.1
-0.5
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
+0.3
N.D.
+0.3
-0.6
+0.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.4
N.D.
+0.5
-0.6
-0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.5
N.D.
+0.4
-1.0
+0.3
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.9
N.D.
+0.3
-0.4
-0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.5
N.D.
+0.5
-0.5
+0.2
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
N.D.
-0.1
+1.7
-0.1
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.9
N.D.
+0.6
-0.7
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.6
N.D.
+0.7
-0.3
-0.0
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.7
N.D.
+0.7
-0.0
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.7
N.D.
+0.6
+0.3
+0.0
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