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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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500 nt
RALBFv3_RS21645 and RALBFv3_RS21650 are separated by 1 nucleotides
RALBFv3_RS21650 and RALBFv3_RS21655 overlap by 11 nucleotides
RALBFv3_RS21655 and RALBFv3_RS21660 are separated by 55 nucleotides
RALBFv3_RS21660 and RALBFv3_RS21665 overlap by 1 nucleotides
RALBFv3_RS21645: RALBFv3_RS21645 - flagellar basal body-associated protein FliL, at 1,585,775 to 1,586,272
_RS21645
RALBFv3_RS21650: RALBFv3_RS21650 - flagellar motor switch protein FliM, at 1,586,274 to 1,587,281
_RS21650
RALBFv3_RS21655: RALBFv3_RS21655 - flagellar motor switch protein FliN, at 1,587,271 to 1,587,735
_RS21655
RALBFv3_RS21660: RALBFv3_RS21660 - flagellar biosynthetic protein FliO, at 1,587,791 to 1,588,180
_RS21660
RALBFv3_RS21665: RALBFv3_RS21665 - flagellar biosynthetic protein FliP, at 1,588,180 to 1,588,929
_RS21665
Group
Condition
RALBFv3
_RS21645
RALBFv3
_RS21650
RALBFv3
_RS21655
RALBFv3
_RS21660
RALBFv3
_RS21665
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
-0.2
N.D.
-0.7
-0.5
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.5
N.D.
-0.6
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.8
+0.2
N.D.
-0.5
-0.6
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.6
+0.0
N.D.
+0.0
-0.8
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.8
-0.0
N.D.
-0.5
-0.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.8
-0.1
N.D.
-1.3
+0.7
m63_quarter_strength
M63_quarter_strength
+0.6
+0.3
N.D.
-0.6
-0.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.1
-0.1
N.D.
-0.2
-0.6
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
+0.2
N.D.
-0.2
-0.7
in planta
tomato xylem local (total stem)
+1.0
+0.0
N.D.
-0.9
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.9
+0.3
N.D.
-0.4
-0.2
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.1
+0.2
N.D.
-0.5
+0.1
in planta
tomato xylem local (total stem)
+1.2
-0.2
N.D.
-0.1
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.0
+0.2
N.D.
-0.3
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.3
+0.2
N.D.
-0.4
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.1
+0.1
N.D.
-0.1
-0.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+1.8
-0.2
N.D.
-0.6
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.3
+0.4
N.D.
-0.3
-0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.9
-0.2
N.D.
+0.0
+0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.9
+0.2
N.D.
-0.1
+0.4
in planta
tomato xylem local (total stem)
+1.0
+0.3
N.D.
-0.1
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.8
+0.4
N.D.
+0.4
-0.1
m63_quarter_strength
M63_quarter_strength
+0.4
+0.2
N.D.
+0.3
+0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
+0.4
N.D.
+0.2
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.4
+0.3
N.D.
+0.4
+0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.3
+0.3
N.D.
-0.2
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+1.2
+0.4
N.D.
-0.5
+0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.2
+0.5
N.D.
+0.3
+0.1
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+1.1
+0.2
N.D.
-0.1
+0.9
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+1.8
-0.1
N.D.
+0.2
+0.4
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RALBFv3_RS21655
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