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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS21580 and RALBFv3_RS21585 are separated by 35 nucleotides
RALBFv3_RS21585 and RALBFv3_RS21590 overlap by 4 nucleotides
RALBFv3_RS21590 and RALBFv3_RS21595 are separated by 236 nucleotides
RALBFv3_RS21595 and RALBFv3_RS21600 are separated by 103 nucleotides
RALBFv3_RS21580: RALBFv3_RS21580 - flagellar assembly protein FliH, at 1,571,074 to 1,571,820
_RS21580
RALBFv3_RS21585: RALBFv3_RS21585 - flagellar motor switch protein FliG, at 1,571,856 to 1,572,848
_RS21585
RALBFv3_RS21590: RALBFv3_RS21590 - flagellar basal body M-ring protein FliF, at 1,572,845 to 1,574,680
_RS21590
RALBFv3_RS21595: RALBFv3_RS21595 - flagellar hook-basal body complex protein FliE, at 1,574,917 to 1,575,249
_RS21595
RALBFv3_RS21600: RALBFv3_RS21600 - mannosyltransferase, at 1,575,353 to 1,576,744
_RS21600
Group
Condition
RALBFv3
_RS21580
RALBFv3
_RS21585
RALBFv3
_RS21590
RALBFv3
_RS21595
RALBFv3
_RS21600
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-1.1
+0.3
+0.0
N.D.
-0.1
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.9
+0.2
+0.3
N.D.
-0.3
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.1
-0.4
-0.3
N.D.
+0.7
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.5
+0.6
+0.4
N.D.
-0.0
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.9
-0.4
+0.1
N.D.
+0.1
in planta
tomato xylem local (total stem)
+1.1
-0.2
-0.2
N.D.
-0.0
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.3
+0.5
+0.7
N.D.
-0.0
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.1
-0.2
+0.2
N.D.
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.0
-0.2
+0.0
N.D.
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.3
+0.4
+0.3
N.D.
+0.5
in planta
tomato xylem local (total stem)
-0.1
+0.3
+0.2
N.D.
+0.6
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.8
+0.2
+0.3
N.D.
-0.2
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
-0.1
-0.0
N.D.
+0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
-0.1
+0.2
N.D.
+0.2
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
-0.0
+0.2
N.D.
+0.7
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+1.0
-0.2
+0.0
N.D.
+0.3
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
-0.1
+0.1
N.D.
+0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.4
+0.3
+0.3
N.D.
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.5
+0.4
+0.5
N.D.
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.6
+0.2
+0.3
N.D.
+0.2
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.0
+0.2
+0.1
N.D.
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.6
+0.5
+0.4
N.D.
-0.1
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.1
-0.1
-0.0
N.D.
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
-0.1
+0.0
N.D.
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.1
-0.2
+0.1
N.D.
+0.3
in planta
tomato xylem local (total stem)
+1.2
+0.1
-0.1
N.D.
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.1
-0.0
+0.1
N.D.
+0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.6
+0.3
+0.6
N.D.
+0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.3
+0.6
+0.8
N.D.
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
+0.7
+0.3
+0.4
N.D.
+0.2
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RALBFv3_RS21590
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RALBFv3_RS21600
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