Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS21450 and RALBFv3_RS21455 are separated by 2 nucleotidesRALBFv3_RS21455 and RALBFv3_RS21460 are separated by 96 nucleotidesRALBFv3_RS21460 and RALBFv3_RS21465 are separated by 224 nucleotidesRALBFv3_RS21465 and RALBFv3_RS24640 are separated by 29 nucleotides RALBFv3_RS21450: RALBFv3_RS21450 - 2,3-diaminopropionate biosynthesis protein SbnB, at 1,535,515 to 1,536,534 _RS21450 RALBFv3_RS21455: RALBFv3_RS21455 - 2,3-diaminopropionate biosynthesis protein SbnA, at 1,536,537 to 1,537,553 _RS21455 RALBFv3_RS21460: RALBFv3_RS21460 - TonB-dependent siderophore receptor, at 1,537,650 to 1,540,076 _RS21460 RALBFv3_RS21465: RALBFv3_RS21465 - RNA polymerase sigma factor, at 1,540,301 to 1,540,891 _RS21465 RALBFv3_RS24640: RALBFv3_RS24640 - hypothetical protein, at 1,540,921 to 1,541,100 _RS24640
Group Condition RALBFv3_RS21450 RALBFv3_RS21455 RALBFv3_RS21460 RALBFv3_RS21465 RALBFv3_RS24640
stress SMSA with Ralstonia_antibiotic_mix -0.2 +0.1 -0.9 -2.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.2 +0.1 -2.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 -0.6 +0.2 -2.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 +0.2 -0.8 -1.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.0 +0.2 -1.2 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.6 +0.1 -0.8 -0.7 N.D.
smsa no antibiotic control SMSA no antibiotic control -0.4 +0.0 -1.0 -0.5 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.1 -0.2 -1.0 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.0 +0.0 -2.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.3 -0.1 -1.0 -0.9 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 +0.2 -1.4 -0.6 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.2 +0.7 -1.8 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.4 -0.5 -1.1 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.2 -0.0 -0.6 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.1 +0.3 -0.8 -0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.3 -0.2 -1.1 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 +0.4 -0.7 -1.1 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.7 +0.3 -1.1 N.D.
in planta tomato xylem local (total stem) +0.4 -0.4 +0.3 -1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.3 +0.3 -0.7 -0.7 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -0.1 -1.2 +1.0 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.0 -0.2 -1.0 +1.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.0 -0.5 -0.5 +1.5 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.2 +0.5 +0.8 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 -0.6 +0.6 +1.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.9 -0.2 -1.0 +1.4 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +1.0 -0.1 -0.3 +0.9 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 -0.6 +0.7 +1.1 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 +0.1 +0.5 +3.3 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 +0.9 +1.0 +2.3 N.D.
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