Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS21265 and RALBFv3_RS21270 are separated by 10 nucleotidesRALBFv3_RS21270 and RALBFv3_RS21275 are separated by 111 nucleotidesRALBFv3_RS21275 and RALBFv3_RS21280 are separated by 140 nucleotidesRALBFv3_RS21280 and RALBFv3_RS21285 overlap by 4 nucleotides RALBFv3_RS21265: RALBFv3_RS21265 - TolC family protein, at 1,494,018 to 1,495,439 _RS21265 RALBFv3_RS21270: RALBFv3_RS21270 - hypothetical protein, at 1,495,450 to 1,495,905 _RS21270 RALBFv3_RS21275: RALBFv3_RS21275 - hypothetical protein, at 1,496,017 to 1,496,427 _RS21275 RALBFv3_RS21280: RALBFv3_RS21280 - DNA-binding response regulator, at 1,496,568 to 1,497,242 _RS21280 RALBFv3_RS21285: RALBFv3_RS21285 - two-component sensor histidine kinase, at 1,497,239 to 1,498,636 _RS21285
Group Condition RALBFv3_RS21265 RALBFv3_RS21270 RALBFv3_RS21275 RALBFv3_RS21280 RALBFv3_RS21285
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. -2.0 -0.6 -0.9
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -2.1 +0.2 -1.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.9 -0.5 -1.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 N.D. -0.5 -0.7 -0.8
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.3 N.D. -1.5 -0.8 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 N.D. -0.9 -0.4 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 N.D. -1.2 +0.1 -0.3
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.2 N.D. -0.7 -0.7 -0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.8 -0.1 -1.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 N.D. -0.0 -0.9 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.3 N.D. -0.4 -0.6 -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.8 N.D. +0.2 -0.6 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.3 N.D. -0.0 -1.0 -0.6
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 N.D. +0.5 -0.4 -0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 N.D. +0.4 -0.5 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.4 N.D. +0.3 -0.7 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 N.D. +0.5 -0.9 -0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. +0.6 -0.6 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.4 N.D. +0.6 -0.3 -0.5
in planta tomato xylem local (total stem) +0.2 N.D. +0.4 -0.3 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 N.D. -0.0 -0.9 -0.1
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 N.D. +0.6 -0.2 -0.8
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 N.D. -0.2 -0.5 +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.0 N.D. +0.8 -0.3 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 N.D. +0.9 -0.8 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 N.D. +0.9 -0.3 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.0 N.D. +0.7 -0.7 +0.2
in planta tomato xylem local (total stem) -0.2 N.D. +0.4 +0.9 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 N.D. +1.0 -0.5 +0.3
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. +3.7 -0.1 -0.5
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