Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RALBFv3_RS21200	RALBFv3_RS21205	RALBFv3_RS21210	RALBFv3_RS21215	RALBFv3_RS21220
in planta	Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.1	-0.2	-0.3	-0.6	-0.4
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.2	-0.0	-0.1	-0.2	-0.7
in planta	Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.4	+0.0	+0.2	-0.4	-0.5
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.2	-0.1	-0.3	-0.3	-0.0
in planta	Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days	-0.2	+0.1	-0.6	-0.1	-0.2
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.5	-0.1	+0.2	+0.1	-0.5
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi	-0.2	-0.2	-0.0	-0.1	-0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.2	+0.0	-0.2	-0.5	-0.4
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.2	-0.1	-0.2	-0.1	-0.1
smsa no antibiotic control	SMSA no antibiotic control	-0.2	-0.1	-0.1	-0.3	-0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	+0.0	-0.1	-0.1	-0.3	-0.3
in planta	Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi	-0.1	+0.0	+0.1	-0.6	-0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	-0.5	-0.1	-0.0	-0.1	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.3	+0.2	+0.1	-0.0	-0.5
in planta	Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days	-0.2	+0.1	+0.3	-0.1	-0.4
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.2	+0.1	+0.2	-0.2	-0.2
in planta	Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days	+0.1	-0.1	+0.4	-0.5	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	+0.1	+0.1	-0.3	-0.3	+0.3
in planta	Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.0	+0.1	+0.3	-0.1	-0.3
in planta	Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi	+0.0	+0.3	+0.1	-0.3	+0.0
in planta	tomato xylem local (total stem)	+0.0	+0.4	+0.2	-0.4	-0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.5	+0.1	+0.1	+0.4	+0.1
in planta	Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days	-0.4	+0.2	+0.5	-0.1	+0.3
in planta	Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days	-0.6	+0.4	+0.5	-0.3	+0.5
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+0.1	-0.0	-0.2	+0.3	+0.3
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.3	+0.3	-0.0	-0.2	+0.2
in planta	Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi	+0.4	+0.3	-0.1	-0.0	+0.2
in planta	tomato xylem local (total stem)	-0.1	+0.3	+0.2	+0.7	-0.3
in planta	Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi	-0.1	-0.0	+0.3	+0.5	+0.3
in planta	Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi	-0.0	+0.1	+0.2	+0.4	+0.5