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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS20920 and RALBFv3_RS20925 are separated by 333 nucleotides
RALBFv3_RS20925 and RALBFv3_RS20930 are separated by 101 nucleotides
RALBFv3_RS20930 and RALBFv3_RS24565 are separated by 141 nucleotides
RALBFv3_RS24565 and RALBFv3_RS20935 are separated by 33 nucleotides
RALBFv3_RS20920: RALBFv3_RS20920 - hypothetical protein, at 1,401,220 to 1,401,588
_RS20920
RALBFv3_RS20925: RALBFv3_RS20925 - endoribonuclease L-PSP, at 1,401,922 to 1,402,299
_RS20925
RALBFv3_RS20930: RALBFv3_RS20930 - amino acid permease, at 1,402,401 to 1,403,825
_RS20930
RALBFv3_RS24565: RALBFv3_RS24565 - IS481 family transposase, at 1,403,967 to 1,404,134
_RS24565
RALBFv3_RS20935: RALBFv3_RS20935 - IS630 family transposase, at 1,404,168 to 1,405,293
_RS20935
Group
Condition
RALBFv3
_RS20920
RALBFv3
_RS20925
RALBFv3
_RS20930
RALBFv3
_RS24565
RALBFv3
_RS20935
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.3
-1.0
-0.1
-0.2
+0.2
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
-3.0
+0.0
+0.0
+0.5
cpg no stress control
CPG no stress control
+0.1
-1.3
+0.0
+0.1
-0.1
in planta
tomato xylem local (total stem)
+0.2
-2.2
+0.2
+0.3
+0.3
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.9
-1.5
-0.1
-0.3
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.8
-1.9
+0.1
+0.0
+0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.7
-1.2
+0.0
-0.0
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
-1.0
-0.1
-0.4
-0.1
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.2
-1.1
-0.3
+0.9
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
-1.1
-0.1
-0.0
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.9
-1.0
-0.2
+0.1
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.0
-0.9
-0.1
-0.1
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.7
-0.6
-0.1
+0.1
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.9
-0.4
-0.1
-0.2
-0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.7
-0.5
-0.2
+0.3
-0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+1.1
-1.4
-0.1
+0.4
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.0
-0.6
-0.1
-0.2
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.9
-0.6
-0.1
+0.5
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.1
-0.9
-0.0
+0.1
+0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.9
-0.3
-0.1
+0.2
+0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.1
-0.4
+0.0
+0.1
-0.0
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.8
-1.0
+0.0
+0.8
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.5
-1.0
-0.0
+0.3
+0.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.6
+0.7
-0.2
+0.1
-0.1
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
+0.9
-0.2
-0.3
-0.0
in planta
tomato xylem local (total stem)
+0.7
+0.4
-0.1
+0.5
-0.2
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.4
+0.5
-0.2
-0.1
-0.0
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+1.1
+0.8
-0.1
+0.1
-0.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.2
+5.4
+0.1
+1.1
-0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.5
+5.5
+0.3
+1.2
-0.1
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RALBFv3_RS20920
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RALBFv3_RS20925
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RALBFv3_RS20930
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RALBFv3_RS24565
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RALBFv3_RS20935
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