Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS20745 and RALBFv3_RS20750 are separated by 198 nucleotidesRALBFv3_RS20750 and RALBFv3_RS20760 are separated by 2708 nucleotidesRALBFv3_RS20760 and RALBFv3_RS20765 are separated by 11 nucleotidesRALBFv3_RS20765 and RALBFv3_RS20770 are separated by 182 nucleotides RALBFv3_RS20745: RALBFv3_RS20745 - IS3 family transposase, at 1,350,066 to 1,351,189 _RS20745 RALBFv3_RS20750: RALBFv3_RS20750 - IS3 family transposase, at 1,351,388 to 1,352,622 _RS20750 RALBFv3_RS20760: RALBFv3_RS20760 - type I secretion system permease/ATPase, at 1,355,331 to 1,357,457 _RS20760 RALBFv3_RS20765: RALBFv3_RS20765 - HlyD family type I secretion periplasmic adaptor subunit, at 1,357,469 to 1,358,878 _RS20765 RALBFv3_RS20770: RALBFv3_RS20770 - TolC family protein, at 1,359,061 to 1,360,407 _RS20770
Group Condition RALBFv3_RS20745 RALBFv3_RS20750 RALBFv3_RS20760 RALBFv3_RS20765 RALBFv3_RS20770
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. -0.1 -0.3 -0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 -0.1 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. -0.2 -0.0 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 +0.0 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -0.1 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -0.1 -0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. -0.1 -0.1 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. -0.1 -0.0 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. N.D. +0.1 -0.2 -0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. N.D. +0.1 -0.2 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. N.D. -0.1 -0.1 -0.1
cpg no stress control CPG no stress control N.D. N.D. -0.0 -0.1 -0.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.1 -0.2 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. -0.1 -0.1 -0.0
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -0.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -0.1 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. N.D. -0.1 -0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.0 -0.2 +0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. N.D. +0.0 -0.1 -0.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.1 -0.1 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.1 -0.0 +0.0
in planta tomato xylem local (total stem) N.D. N.D. +0.1 -0.1 -0.2
in planta tomato xylem local (total stem) N.D. N.D. +0.1 -0.2 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.0 -0.1 +0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. N.D. -0.1 +0.0 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. -0.1 +0.1 +0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.2 +0.0 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. +0.1 +0.1 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.0 +0.1 +0.2
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RALBFv3_RS20745
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RALBFv3_RS20750
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RALBFv3_RS20765
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RALBFv3_RS20770
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