Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS20505 and RALBFv3_RS20510 are separated by 2 nucleotidesRALBFv3_RS20510 and RALBFv3_RS20515 overlap by 4 nucleotidesRALBFv3_RS20515 and RALBFv3_RS20520 overlap by 4 nucleotidesRALBFv3_RS20520 and RALBFv3_RS20525 overlap by 4 nucleotides RALBFv3_RS20505: RALBFv3_RS20505 - membrane protein, at 1,302,039 to 1,303,610 _RS20505 RALBFv3_RS20510: RALBFv3_RS20510 - cobalamin biosynthesis protein CbiD, at 1,303,613 to 1,304,764 _RS20510 RALBFv3_RS20515: RALBFv3_RS20515 - precorrin-2 C(20)-methyltransferase, at 1,304,761 to 1,305,492 _RS20515 RALBFv3_RS20520: RALBFv3_RS20520 - precorrin-4 C(11)-methyltransferase, at 1,305,489 to 1,306,325 _RS20520 RALBFv3_RS20525: RALBFv3_RS20525 - cobalamin biosynthesis protein CbiG, at 1,306,322 to 1,307,086 _RS20525
Group Condition RALBFv3_RS20505 RALBFv3_RS20510 RALBFv3_RS20515 RALBFv3_RS20520 RALBFv3_RS20525
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -1.1 -1.1 -1.0 -1.2 -1.4
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -1.3 -0.7 -1.1 -1.3 -1.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.8 -0.9 -0.9 -1.5 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.0 -0.7 -2.4 -0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.1 -0.1 -0.7 -1.3
in planta tomato xylem local (total stem) -0.5 -0.1 -0.2 -1.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.1 -0.7 +0.2 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 +0.1 -0.7 -0.4 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.0 -0.4 -1.1 +0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 -0.0 -0.7 -0.6 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.1 -0.4 -0.7 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.0 -0.6 -0.1 -1.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.4 +0.1 -0.3 -0.6 -0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.8 +0.1 -0.3 -0.1 -0.5
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.0 -0.4 -0.3 -0.8 -0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.2 +0.1 +0.0 -0.5 -0.9
in planta tomato xylem local (total stem) -0.5 -0.0 -0.3 +0.1 -0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 -0.4 -0.3 +0.3 -0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 -0.2 -0.4 +0.2 -0.5
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 -0.1 +0.2 -0.5 -0.7
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.2 -0.3 +0.4 -0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 +0.4 -0.0 -0.1 -1.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.2 +0.1 -0.5 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 +0.1 -0.3 -0.7 -0.5
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 -0.2 +0.2 +0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.4 +0.5 -0.4 +0.6 +0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.0 +0.9 -0.5 +0.7 -0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +1.1 -0.3 +0.4 +0.6
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.6 +0.2 +0.3 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 +0.4 +0.4 +0.8 +0.1
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