Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS20210 and RALBFv3_RS20215 are separated by 66 nucleotidesRALBFv3_RS20215 and RALBFv3_RS20220 are separated by 11 nucleotidesRALBFv3_RS20220 and RALBFv3_RS20225 are separated by 288 nucleotidesRALBFv3_RS20225 and RALBFv3_RS20230 overlap by 4 nucleotides RALBFv3_RS20210: RALBFv3_RS20210 - MBL fold hydrolase, at 1,227,777 to 1,228,736 _RS20210 RALBFv3_RS20215: RALBFv3_RS20215 - FAD-dependent oxidoreductase, at 1,228,803 to 1,230,479 _RS20215 RALBFv3_RS20220: RALBFv3_RS20220 - DUF2783 domain-containing protein, at 1,230,491 to 1,230,697 _RS20220 RALBFv3_RS20225: RALBFv3_RS20225 - RNA ligase RtcB family protein, at 1,230,986 to 1,232,125 _RS20225 RALBFv3_RS20230: RALBFv3_RS20230 - peptide chain release factor H, at 1,232,122 to 1,232,745 _RS20230
Group Condition RALBFv3_RS20210 RALBFv3_RS20215 RALBFv3_RS20220 RALBFv3_RS20225 RALBFv3_RS20230
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.9 -0.4 N.D. -0.1 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -1.3 N.D. +0.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 -0.4 N.D. -0.2 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 -0.8 N.D. +0.4 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.7 -0.5 N.D. +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.6 -0.7 N.D. +0.3 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.8 N.D. +0.3 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -1.2 N.D. +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.0 -0.1 N.D. +0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.1 N.D. +0.3 N.D.
m63_quarter_strength M63_quarter_strength -0.9 +0.2 N.D. +0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.8 N.D. +0.4 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.0 +0.5 N.D. +0.1 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 -0.5 N.D. +0.4 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -1.1 N.D. +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.0 +0.2 N.D. +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 +0.4 N.D. +0.2 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.4 -0.2 N.D. +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.6 -0.4 N.D. -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.6 N.D. +0.1 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.9 N.D. +1.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.4 N.D. +0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 +0.1 N.D. +0.9 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.5 +0.6 N.D. +0.3 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 -0.6 N.D. +0.7 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.7 N.D. +0.2 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 +0.4 N.D. -0.1 N.D.
in planta tomato xylem local (total stem) +0.2 +0.3 N.D. +0.5 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.6 N.D. +0.7 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +1.7 -0.2 N.D. +0.4 N.D.
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