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Cofit
Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS19745 and RALBFv3_RS19750 are separated by 31 nucleotides
RALBFv3_RS19750 and RALBFv3_RS19755 are separated by 229 nucleotides
RALBFv3_RS19755 and RALBFv3_RS19760 are separated by 83 nucleotides
RALBFv3_RS19760 and RALBFv3_RS19765 are separated by 109 nucleotides
RALBFv3_RS19745: RALBFv3_RS19745 - aldehyde dehydrogenase (NADP(+)), at 1,108,876 to 1,110,462
_RS19745
RALBFv3_RS19750: RALBFv3_RS19750 - 5-dehydro-4-deoxyglucarate dehydratase, at 1,110,494 to 1,111,429
_RS19750
RALBFv3_RS19755: RALBFv3_RS19755 - methyltransferase domain-containing protein, at 1,111,659 to 1,112,579
_RS19755
RALBFv3_RS19760: RALBFv3_RS19760 - SMP-30/gluconolactonase/LRE family protein, at 1,112,663 to 1,113,724
_RS19760
RALBFv3_RS19765: RALBFv3_RS19765 - LysR family transcriptional regulator, at 1,113,834 to 1,114,730
_RS19765
Group
Condition
RALBFv3
_RS19745
RALBFv3
_RS19750
RALBFv3
_RS19755
RALBFv3
_RS19760
RALBFv3
_RS19765
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.0
-0.6
-0.0
-1.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-1.2
-0.7
+0.2
+0.2
-0.4
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.8
-0.2
+0.1
+0.2
-1.0
m63_quarter_strength
M63_quarter_strength
-0.6
+0.1
-0.2
+0.1
-1.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.4
-0.4
-0.3
+0.1
-0.7
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.2
-0.8
-0.2
+0.2
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
-0.2
-0.3
+0.1
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.3
+0.1
+0.4
-1.1
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.0
-0.2
-0.1
+0.4
-0.5
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
-0.5
+0.2
+0.1
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.6
-0.5
+0.6
+0.5
-1.3
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.6
-0.3
+0.0
+0.0
-0.4
in planta
tomato xylem local (total stem)
-0.4
-0.3
+0.2
-0.6
-0.1
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
-0.2
+0.1
+0.1
-0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.8
-0.1
-0.3
+0.3
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.3
+0.0
+0.4
-0.5
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.9
-0.4
+0.5
+0.1
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
-0.2
+0.1
+0.3
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.5
-0.1
-0.3
+0.6
-0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.2
-0.0
+0.4
-0.1
-0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-0.3
+0.1
+0.3
-0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.6
-0.2
-0.2
-0.0
+0.5
in planta
tomato xylem local (total stem)
-0.3
+0.0
-0.4
-0.2
+0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.4
+0.3
+0.5
-0.0
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.6
+0.1
-0.2
-0.2
-0.3
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-0.3
+0.5
-0.1
+0.5
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.2
-0.0
+0.3
-0.3
+1.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.3
-0.1
+0.3
+0.1
+0.8
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.3
-0.6
+0.9
-0.3
+2.4
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.6
-0.0
+0.9
-0.0
+2.4
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RALBFv3_RS19755
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