Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS19105 and RALBFv3_RS19110 are separated by 75 nucleotidesRALBFv3_RS19110 and RALBFv3_RS19115 overlap by 4 nucleotidesRALBFv3_RS19115 and RALBFv3_RS19120 are separated by 2 nucleotidesRALBFv3_RS19120 and RALBFv3_RS19125 overlap by 4 nucleotides RALBFv3_RS19105: RALBFv3_RS19105 - EpsG family protein, at 860,621 to 861,895 _RS19105 RALBFv3_RS19110: RALBFv3_RS19110 - transferase, at 861,971 to 863,134 _RS19110 RALBFv3_RS19115: RALBFv3_RS19115 - acyltransferase, at 863,131 to 863,643 _RS19115 RALBFv3_RS19120: RALBFv3_RS19120 - dehydrogenase, at 863,646 to 865,787 _RS19120 RALBFv3_RS19125: RALBFv3_RS19125 - threonine dehydrogenase-zn-dependent dehydrogenase, at 865,784 to 867,619 _RS19125
Group Condition RALBFv3_RS19105 RALBFv3_RS19110 RALBFv3_RS19115 RALBFv3_RS19120 RALBFv3_RS19125
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.7 -2.1 N.D. -1.9 -2.6
in planta tomato xylem local (total stem) -0.2 -1.8 N.D. -1.8 -2.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -2.2 N.D. -1.3 -1.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -1.3 N.D. -1.3 -1.7
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -1.5 N.D. -1.3 -1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.3 -0.3 N.D. -1.4 -1.9
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -2.0 N.D. -0.1 -1.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -1.3 N.D. -1.6 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -1.1 N.D. -1.1 -1.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -1.1 N.D. -1.0 -1.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 -0.6 N.D. -1.5 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.5 -0.7 N.D. -0.9 -0.8
in planta tomato xylem local (total stem) -0.8 -0.8 N.D. -0.8 -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.6 N.D. -1.3 -1.5
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 -0.9 N.D. -0.9 -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.7 N.D. -1.1 -1.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.5 -1.1 N.D. -0.8 -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.9 N.D. -0.9 -1.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -0.8 N.D. -0.8 -1.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.2 -0.7 N.D. -0.9 -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.5 N.D. -0.8 -1.5
in planta tomato xylem local (total stem) +0.1 -0.9 N.D. -0.5 -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.4 N.D. -0.9 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.3 N.D. -0.9 -1.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.7 N.D. -0.9 -1.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -1.3 N.D. -0.3 -0.6
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.4 -0.7 N.D. -0.9 -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.5 -0.6 N.D. -0.7 -0.9
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.1 N.D. -0.6 -0.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 +1.4 N.D. +0.3 +1.1
remove
RALBFv3_RS19105
plot		 remove
RALBFv3_RS19110
plot		 remove
RALBFv3_RS19115		 remove
RALBFv3_RS19120
plot		 remove
RALBFv3_RS19125
plot