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Cofit
Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS18965 and RALBFv3_RS18970 are separated by 56 nucleotides
RALBFv3_RS18970 and RALBFv3_RS18975 are separated by 472 nucleotides
RALBFv3_RS18975 and RALBFv3_RS18980 are separated by 322 nucleotides
RALBFv3_RS18980 and RALBFv3_RS18985 are separated by 159 nucleotides
RALBFv3_RS18965: RALBFv3_RS18965 - membrane protein, at 805,897 to 806,772
_RS18965
RALBFv3_RS18970: RALBFv3_RS18970 - hypothetical protein, at 806,829 to 807,560
_RS18970
RALBFv3_RS18975: RALBFv3_RS18975 - methyl-accepting chemotaxis protein, at 808,033 to 809,607
_RS18975
RALBFv3_RS18980: RALBFv3_RS18980 - hypothetical protein, at 809,930 to 811,030
_RS18980
RALBFv3_RS18985: RALBFv3_RS18985 - salicylate synthase, at 811,190 to 814,213
_RS18985
Group
Condition
RALBFv3
_RS18965
RALBFv3
_RS18970
RALBFv3
_RS18975
RALBFv3
_RS18980
RALBFv3
_RS18985
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.0
-1.5
-0.2
-0.2
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.8
-0.3
-0.1
+0.1
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.1
-0.1
-0.9
-0.3
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.0
-0.1
-0.6
-0.4
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.6
+0.3
-0.1
-0.5
+0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.2
-0.2
-0.5
-0.3
+0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.3
+0.1
-0.3
-0.8
-0.0
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
+0.2
-0.0
-0.7
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
+0.1
-0.4
-0.6
+0.3
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
+0.1
+0.2
-0.6
+0.1
stress
SMSA with Ralstonia_antibiotic_mix
-0.6
-0.0
+0.4
-0.2
-0.0
m63_quarter_strength
M63_quarter_strength
+0.2
+0.0
+0.2
-0.9
+0.0
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
-0.2
-0.3
-0.1
-0.3
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.5
-0.1
+0.4
-1.1
+0.1
in planta
tomato xylem local (total stem)
-0.6
+0.2
-0.1
-0.2
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.5
+0.3
+0.4
-0.6
+0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.3
-0.1
+0.3
+0.3
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
-0.1
-0.3
-0.4
+0.5
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.5
-0.0
+0.8
-0.3
+0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.4
-0.1
+0.2
-0.5
+0.1
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
+0.0
-0.3
-0.4
+0.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.1
+0.4
+0.1
-0.7
+0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.4
-0.1
+0.3
-0.7
+0.3
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.2
+0.0
+0.7
-0.5
+0.1
in planta
tomato xylem local (total stem)
-0.3
+0.6
+0.3
-0.7
+0.7
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.4
+0.2
+0.1
-0.3
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
+0.3
+1.0
-0.5
+0.3
in planta
tomato xylem local (total stem)
+0.3
+0.4
+0.2
-0.3
+0.4
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
+0.3
+0.7
-0.1
-0.0
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.8
+0.4
+0.7
-0.6
+0.7
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RALBFv3_RS18975
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