Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS18425 and RALBFv3_RS18430 are separated by 878 nucleotidesRALBFv3_RS18430 and RALBFv3_RS18435 are separated by 165 nucleotidesRALBFv3_RS18435 and RALBFv3_RS18440 are separated by 50 nucleotidesRALBFv3_RS18440 and RALBFv3_RS18445 are separated by 136 nucleotides RALBFv3_RS18425: RALBFv3_RS18425 - trehalose-phosphatase, at 659,120 to 659,908 _RS18425 RALBFv3_RS18430: RALBFv3_RS18430 - integrase, at 660,787 to 661,758 _RS18430 RALBFv3_RS18435: RALBFv3_RS18435 - UDP-glucose 4-epimerase GalE, at 661,924 to 662,949 _RS18435 RALBFv3_RS18440: RALBFv3_RS18440 - sensor histidine kinase, at 663,000 to 664,448 _RS18440 RALBFv3_RS18445: RALBFv3_RS18445 - membrane protein, at 664,585 to 666,126 _RS18445
Group Condition RALBFv3_RS18425 RALBFv3_RS18430 RALBFv3_RS18435 RALBFv3_RS18440 RALBFv3_RS18445
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -2.9 -2.1 +0.5 +0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. +0.0 -3.5 +0.2 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.2 -2.8 -0.2 +0.0
in planta tomato xylem local (total stem) N.D. -0.3 -3.1 +0.6 +0.1
in planta tomato xylem local (total stem) N.D. -0.0 -3.1 +0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.1 -2.3 -0.1 -0.0
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. +0.0 -2.0 -0.0 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.3 -1.6 -0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.5 -0.8 +0.5 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.0 -2.5 +0.5 +0.2
smsa no antibiotic control SMSA no antibiotic control N.D. +0.3 -2.0 +0.1 +0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.0 -1.8 +0.2 -0.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.0 -2.1 +0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.4 -1.9 -0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.6 -2.1 +0.4 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.9 -2.7 +0.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +1.0 -2.8 +0.5 -0.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.5 -2.0 +0.7 -0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 -1.4 +0.3 +0.3
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 -1.3 -0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 -0.9 +0.8 +0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.5 -0.7 +0.7 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.5 -1.4 +0.5 +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.7 +1.1 -0.4 +0.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.4 -1.9 +0.3 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.1 -0.7 +0.4 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.3 -0.9 +0.6 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 +1.3 +0.5 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.5 -0.2 -0.2 +0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.3 +0.8 +0.8 +0.2
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