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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS17910 and RALBFv3_RS17915 are separated by 0 nucleotides
RALBFv3_RS17915 and RALBFv3_RS17920 are separated by 153 nucleotides
RALBFv3_RS17920 and RALBFv3_RS17925 are separated by 101 nucleotides
RALBFv3_RS17925 and RALBFv3_RS17930 are separated by 3 nucleotides
RALBFv3_RS17910: RALBFv3_RS17910 - hypothetical protein, at 523,720 to 523,959
_RS17910
RALBFv3_RS17915: RALBFv3_RS17915 - type III effector protein, at 523,960 to 526,056
_RS17915
RALBFv3_RS17920: RALBFv3_RS17920 - LysR family transcriptional regulator, at 526,210 to 527,142
_RS17920
RALBFv3_RS17925: RALBFv3_RS17925 - diguanylate cyclase, at 527,244 to 527,909
_RS17925
RALBFv3_RS17930: RALBFv3_RS17930 - diguanylate cyclase, at 527,913 to 528,578
_RS17930
Group
Condition
RALBFv3
_RS17910
RALBFv3
_RS17915
RALBFv3
_RS17920
RALBFv3
_RS17925
RALBFv3
_RS17930
in planta
tomato xylem local (total stem)
+0.0
-0.1
N.D.
-0.6
-0.5
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.0
-0.1
N.D.
-0.7
-0.6
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.1
+0.2
N.D.
-0.5
-0.8
cpg no stress control
CPG no stress control
-0.5
+0.1
N.D.
-0.2
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
+0.1
N.D.
-0.2
-1.0
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.1
N.D.
-0.3
-1.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.0
-0.0
N.D.
-0.4
-0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.0
N.D.
-0.6
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.0
-0.1
N.D.
-0.3
-0.5
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.1
+0.1
N.D.
-0.6
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
+0.2
N.D.
-0.0
-0.9
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.1
N.D.
+0.1
-0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.2
N.D.
-0.3
-0.4
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.2
N.D.
-0.5
-0.3
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.1
+0.2
N.D.
+0.1
-0.8
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.1
+0.2
N.D.
-0.5
-0.2
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.4
+0.0
N.D.
-0.7
-0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.4
-0.1
N.D.
-0.2
-0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+0.4
N.D.
-0.6
+0.2
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.3
+0.2
N.D.
-0.5
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.3
+0.3
N.D.
+0.0
-0.5
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.0
-0.6
N.D.
+0.1
+0.6
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.2
-0.3
N.D.
+0.3
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.4
+0.2
N.D.
+0.3
-0.5
in planta
tomato xylem local (total stem)
+0.4
+0.4
N.D.
-0.0
-0.3
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.3
+0.4
N.D.
+0.2
+0.2
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.2
N.D.
-0.3
+0.4
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.0
N.D.
+0.5
+0.4
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.3
-0.0
N.D.
-0.1
+0.7
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.0
+0.3
N.D.
+0.3
+0.3
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RALBFv3_RS17920
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