Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS17890 and RALBFv3_RS17895 are separated by 781 nucleotidesRALBFv3_RS17895 and RALBFv3_RS17900 are separated by 208 nucleotidesRALBFv3_RS17900 and RALBFv3_RS17905 are separated by 25 nucleotidesRALBFv3_RS17905 and RALBFv3_RS17910 overlap by 1 nucleotides RALBFv3_RS17890: RALBFv3_RS17890 - 4-hydroxy-tetrahydrodipicolinate synthase, at 520,073 to 520,969 _RS17890 RALBFv3_RS17895: RALBFv3_RS17895 - TetR/AcrR family transcriptional regulator, at 521,751 to 522,407 _RS17895 RALBFv3_RS17900: RALBFv3_RS17900 - DoxX family protein, at 522,616 to 523,038 _RS17900 RALBFv3_RS17905: RALBFv3_RS17905 - GTP cyclohydrolase II RibA, at 523,064 to 523,720 _RS17905 RALBFv3_RS17910: RALBFv3_RS17910 - hypothetical protein, at 523,720 to 523,959 _RS17910
Group Condition RALBFv3_RS17890 RALBFv3_RS17895 RALBFv3_RS17900 RALBFv3_RS17905 RALBFv3_RS17910
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 -0.9 -0.0 -0.3 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 -0.8 +0.0 -0.5 -0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -1.1 +0.1 -0.8 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 -0.8 +0.1 -0.4 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 -0.7 +0.1 -0.4 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -0.5 -0.5 -0.1 +0.2
in planta tomato xylem local (total stem) +0.5 -0.9 -0.6 -0.0 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -0.3 -0.1 -0.8 +0.4
in planta tomato xylem local (total stem) +1.1 -0.8 -0.1 -0.7 +0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -0.7 +0.5 -0.3 +0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.8 +0.0 +0.3 -0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.2 -0.5 +0.2 +0.4 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 -0.8 -0.1 -0.0 +0.3
cpg no stress control CPG no stress control +0.4 -0.2 +0.2 +0.2 -0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.7 -0.8 +0.0 +0.3 -0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.3 -0.6 +0.0 +0.1 +0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.5 +0.5 -0.3 -0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.6 -0.5 +0.2 -0.1 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.5 +0.1 +0.1 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.8 -0.8 +0.4 -0.0 +0.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 -0.9 +0.7 +0.2 -0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.7 +0.2 +0.3 +0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 -0.7 +0.4 +0.1 -0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 -0.3 +0.4 -0.2 +0.3
in planta tomato xylem local (total stem) +0.4 -0.5 +0.4 +0.3 +0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.5 -0.5 +0.4 -0.1 +0.4
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.9 +1.1 +0.4 -0.1
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.6 -0.7 +0.3 +0.3 +0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +1.1 -0.5 +0.0 +0.4 -0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 -0.5 +0.6 +0.0 +0.2
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RALBFv3_RS17890
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RALBFv3_RS17895
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RALBFv3_RS17905
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RALBFv3_RS17910
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