Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS17865 and RALBFv3_RS17870 are separated by 78 nucleotidesRALBFv3_RS17870 and RALBFv3_RS17875 are separated by 24 nucleotidesRALBFv3_RS17875 and RALBFv3_RS24300 are separated by 121 nucleotidesRALBFv3_RS24300 and RALBFv3_RS17885 overlap by 4 nucleotides RALBFv3_RS17865: RALBFv3_RS17865 - DeoR/GlpR transcriptional regulator, at 512,964 to 513,728 _RS17865 RALBFv3_RS17870: RALBFv3_RS17870 - glycosyl hydrolase, at 513,807 to 514,985 _RS17870 RALBFv3_RS17875: RALBFv3_RS17875 - sodium:solute symporter family protein, at 515,010 to 516,440 _RS17875 RALBFv3_RS24300: RALBFv3_RS24300 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 516,562 to 518,871 _RS24300 RALBFv3_RS17885: RALBFv3_RS17885 - alcohol dehydrogenase, at 518,868 to 520,037 _RS17885
Group Condition RALBFv3_RS17865 RALBFv3_RS17870 RALBFv3_RS17875 RALBFv3_RS24300 RALBFv3_RS17885
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 -0.6 -0.1 +0.2 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.1 +0.0 -0.3 +0.4 +0.0
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 +0.2 -0.1 +0.5 -0.6
cpg no stress control CPG no stress control -0.9 -0.1 -0.2 +0.3 -0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.2 -0.0 +0.7 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.3 +0.0 +0.4 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.2 -0.3 +0.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.7 +0.0 +0.7 -0.2
in planta tomato xylem local (total stem) -0.4 -0.2 -0.5 +0.1 +0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.0 +0.4 -0.1 +0.5 -0.3
m63_quarter_strength M63_quarter_strength -0.5 +0.2 -0.2 +0.6 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.7 +0.6 -0.0 +0.1 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.2 -0.2 +0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.1 -0.2 +0.6 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 +0.5 +0.2 -0.5 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.8 +0.4 -0.1 +0.5 -0.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 -0.2 -0.1 +0.9 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.0 -0.6 -0.1 +0.8 -0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.3 -0.3 -0.3 +0.6 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 +0.3 +0.1 +0.4 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.6 -0.2 +0.3 +0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.4 +0.1 +0.5 -0.4
in planta tomato xylem local (total stem) -0.5 -0.2 -0.1 +0.8 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 -0.3 +0.8 +0.3
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 -0.3 -0.2 -0.2 +1.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 +0.3 -0.2 +0.7 +0.0
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 +0.4 +0.3 -0.0 +1.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.2 -0.2 +1.0 +0.0
in planta tomato xylem local (total stem) -0.1 -0.1 -0.0 +1.3 +0.4
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 +0.4 -0.0 +0.9 +0.1
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