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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS17860 and RALBFv3_RS17865 are separated by 2 nucleotides
RALBFv3_RS17865 and RALBFv3_RS17870 are separated by 78 nucleotides
RALBFv3_RS17870 and RALBFv3_RS17875 are separated by 24 nucleotides
RALBFv3_RS17875 and RALBFv3_RS24300 are separated by 121 nucleotides
RALBFv3_RS17860: RALBFv3_RS17860 - NAD(P)-dependent oxidoreductase, at 512,251 to 512,961
_RS17860
RALBFv3_RS17865: RALBFv3_RS17865 - DeoR/GlpR transcriptional regulator, at 512,964 to 513,728
_RS17865
RALBFv3_RS17870: RALBFv3_RS17870 - glycosyl hydrolase, at 513,807 to 514,985
_RS17870
RALBFv3_RS17875: RALBFv3_RS17875 - sodium:solute symporter family protein, at 515,010 to 516,440
_RS17875
RALBFv3_RS24300: RALBFv3_RS24300 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 516,562 to 518,871
_RS24300
Group
Condition
RALBFv3
_RS17860
RALBFv3
_RS17865
RALBFv3
_RS17870
RALBFv3
_RS17875
RALBFv3
_RS24300
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-1.1
+0.0
-0.3
+0.4
in planta
tomato xylem local (total stem)
N.D.
-0.4
-0.2
-0.5
+0.1
cpg no stress control
CPG no stress control
N.D.
-0.9
-0.1
-0.2
+0.3
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
-0.3
-0.6
-0.1
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.6
-0.3
+0.0
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.5
-0.7
+0.0
+0.7
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.0
+0.4
+0.3
-0.0
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.0
+0.2
-0.1
+0.5
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
N.D.
-0.8
-0.2
-0.1
+0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.7
+0.2
-0.2
+0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+0.2
-0.6
-0.2
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.5
+0.1
-0.2
+0.4
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
-1.0
+0.4
-0.1
+0.5
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
-0.3
+0.5
+0.2
-0.5
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
-0.8
+0.4
-0.1
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.5
-0.1
-0.2
+0.6
m63_quarter_strength
M63_quarter_strength
N.D.
-0.5
+0.2
-0.2
+0.6
in planta
tomato xylem local (total stem)
N.D.
-0.5
-0.2
-0.1
+0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
N.D.
-0.7
+0.6
-0.0
+0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
+0.0
-0.6
-0.1
+0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.7
+0.3
+0.1
+0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.3
-0.2
-0.0
+0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.4
+0.1
-0.3
+0.8
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
+0.0
-0.5
+0.1
+0.6
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
+0.3
-0.3
-0.3
+0.6
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.3
+0.4
+0.1
+0.5
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
+0.2
+0.3
-0.2
+0.7
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+0.4
-0.2
-0.2
+1.0
in planta
tomato xylem local (total stem)
N.D.
-0.1
-0.1
-0.0
+1.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
+0.2
+0.4
-0.0
+0.9
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