Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS17605 and RALBFv3_RS17610 are separated by 48 nucleotidesRALBFv3_RS17610 and RALBFv3_RS17615 are separated by 341 nucleotidesRALBFv3_RS17615 and RALBFv3_RS17620 are separated by 41 nucleotidesRALBFv3_RS17620 and RALBFv3_RS17625 are separated by 79 nucleotides RALBFv3_RS17605: RALBFv3_RS17605 - branched-chain amino acid ABC transporter permease, at 450,748 to 451,617 _RS17605 RALBFv3_RS17610: RALBFv3_RS17610 - ABC transporter substrate-binding protein, at 451,666 to 452,925 _RS17610 RALBFv3_RS17615: RALBFv3_RS17615 - DUF350 domain-containing protein, at 453,267 to 453,656 _RS17615 RALBFv3_RS17620: RALBFv3_RS17620 - membrane protein, at 453,698 to 454,732 _RS17620 RALBFv3_RS17625: RALBFv3_RS17625 - DUF4178 domain-containing protein, at 454,812 to 456,260 _RS17625
Group Condition RALBFv3_RS17605 RALBFv3_RS17610 RALBFv3_RS17615 RALBFv3_RS17620 RALBFv3_RS17625
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.3 -0.7 +0.1 -0.5
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -0.6 -0.7 -0.0 +0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.7 -0.9 +0.2 -0.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.2 -0.9 +0.1 -0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.7 -1.1 +0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.6 -0.1 +0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.6 -0.5 +0.1 -0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.1 +0.3 -0.9 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.0 -1.1 +0.2 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 +0.1 +0.5 -0.4 -0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.6 -0.8 +0.8 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -0.1 -0.7 +0.3 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.4 -0.1 +0.3 -0.4
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.7 -0.7 +0.1 -0.2 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.3 -0.6 +0.9 -0.1 -0.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.4 +0.1 +0.5 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 -0.5 -0.2 +0.4 +0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.3 +0.1 +0.5 -0.2
in planta tomato xylem local (total stem) +0.8 +0.2 +0.2 +0.0 -0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.5 +0.7 +0.4 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.4 -0.3 +0.7 +0.0 +0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.5 -0.4 +0.7 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.4 +0.3 +0.6 -0.0
stress SMSA with Ralstonia_antibiotic_mix +0.4 -0.1 +0.6 +0.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 -0.3 +0.3 +0.5 -0.1
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.4 +0.2 +0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.6 -0.0 +0.7 +0.1 -0.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.4 -0.1 +0.9 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.6 -0.0 +0.7 +0.1 +0.1
in planta tomato xylem local (total stem) +0.6 -0.3 +0.8 +0.5 +0.2
remove
RALBFv3_RS17605
plot		 remove
RALBFv3_RS17610
plot		 remove
RALBFv3_RS17615		 remove
RALBFv3_RS17620
plot		 remove
RALBFv3_RS17625
plot