Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS17435 and RALBFv3_RS17440 are separated by 12 nucleotidesRALBFv3_RS17440 and RALBFv3_RS17445 are separated by 116 nucleotidesRALBFv3_RS17445 and RALBFv3_RS17450 are separated by 144 nucleotidesRALBFv3_RS17450 and RALBFv3_RS17455 are separated by 77 nucleotides RALBFv3_RS17435: RALBFv3_RS17435 - sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein, at 404,043 to 405,923 _RS17435 RALBFv3_RS17440: RALBFv3_RS17440 - porin, at 405,936 to 406,979 _RS17440 RALBFv3_RS17445: RALBFv3_RS17445 - shikimate dehydrogenase, at 407,096 to 408,049 _RS17445 RALBFv3_RS17450: RALBFv3_RS17450 - type II 3-dehydroquinate dehydratase, at 408,194 to 408,658 _RS17450 RALBFv3_RS17455: RALBFv3_RS17455 - MFS transporter, at 408,736 to 410,061 _RS17455
Group Condition RALBFv3_RS17435 RALBFv3_RS17440 RALBFv3_RS17445 RALBFv3_RS17450 RALBFv3_RS17455
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.3 -0.2 -0.4 -0.3 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.2 -0.3 -0.2 -0.3 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 -0.3 -0.1 -0.2 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +0.1 -0.3 -0.3 -0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -0.3 -0.1 -0.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.5 -0.0 +0.1 -0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.1 +0.2 +0.0 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.2 +0.3 -0.1 +0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.0 +0.5 -0.2 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 +0.2 +0.1 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 +0.1 +0.5 +0.0 +0.2
in planta tomato xylem local (total stem) -0.2 -0.1 +0.5 -0.1 +0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.0 +0.4 +0.2 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.4 +0.0 +0.5 +0.3 -0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 -0.1 +0.4 -0.2 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.4 +0.1 +0.5 +0.1 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.1 +0.2 +0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.2 +0.3 +0.2 +0.1
in planta tomato xylem local (total stem) -0.4 +0.2 +0.1 +0.3 +0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.0 +0.1 -0.1 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.1 -0.3 +0.2 +0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.1 +0.6 +0.4 +0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.4 +0.3 +0.8 -0.0 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.2 +0.3 +0.2 +0.2 -0.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +0.2 +0.3 +0.3 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.3 +0.3 +0.4 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.1 +0.5 +0.0 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.2 +0.5 +0.2 +0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.0 +0.5 +0.7 +0.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.2 +0.2 +0.3 +0.1
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RALBFv3_RS17435
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RALBFv3_RS17440
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RALBFv3_RS17455
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