Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS16405 and RALBFv3_RS24160 are separated by 17 nucleotidesRALBFv3_RS24160 and RALBFv3_RS16410 are separated by 24 nucleotidesRALBFv3_RS16410 and RALBFv3_RS16415 are separated by 141 nucleotidesRALBFv3_RS16415 and RALBFv3_RS16420 are separated by 6 nucleotides RALBFv3_RS16405: RALBFv3_RS16405 - MurR/RpiR family transcriptional regulator, at 136,715 to 137,572 _RS16405 RALBFv3_RS24160: RALBFv3_RS24160 - hypothetical protein, at 137,590 to 137,832 _RS24160 RALBFv3_RS16410: RALBFv3_RS16410 - hypothetical protein, at 137,857 to 140,064 _RS16410 RALBFv3_RS16415: RALBFv3_RS16415 - DNA-binding response regulator, at 140,206 to 140,946 _RS16415 RALBFv3_RS16420: RALBFv3_RS16420 - two-component sensor histidine kinase, at 140,953 to 142,269 _RS16420
Group Condition RALBFv3_RS16405 RALBFv3_RS24160 RALBFv3_RS16410 RALBFv3_RS16415 RALBFv3_RS16420
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.9 +0.4 -0.2 -0.3 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 -0.4 +0.1 +0.3 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.3 +0.3 +0.0 -0.1 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.1 +0.2 +0.0 -0.0 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.4 +0.3 +0.1 +0.2 +0.1
in planta tomato xylem local (total stem) -0.5 -0.3 -0.1 +0.5 -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 -0.1 -0.1 +0.6 -0.5
in planta tomato xylem local (total stem) -0.6 -0.1 -0.1 +0.6 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 -0.3 -0.3 +0.5 -0.2
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.4 -0.1 -0.2 +0.6 -0.6
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.5 -0.2 +0.5 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.5 -0.5 +0.0 +0.5 -0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.8 -0.4 -0.0 +0.6 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.8 -0.2 +0.1 +0.3 -0.3
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.5 -0.3 -0.2 +0.6 +0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.9 -0.2 +0.1 +0.2 -0.1
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.6 +0.0 +0.8 +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 -0.0 +0.1 +0.3 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.2 +0.2 +0.3 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 +0.7 -0.1 +0.5 -0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.4 -0.1 +0.0 +0.4 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.5 -0.3 +0.2 +0.5 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.7 -0.0 +0.7 -0.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.5 -0.1 +0.1 +0.4 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.1 +0.1 +0.2 +0.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 +0.9 +0.1 +0.4 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.6 -0.1 +0.2 +0.4 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +1.4 +0.5 -0.2 +0.2 +0.0
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 +0.2 +0.3 +0.8 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 +1.0 +0.2 +0.5 +0.0
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RALBFv3_RS16405
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RALBFv3_RS24160
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