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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS16350 and RALBFv3_RS16355 overlap by 4 nucleotides
RALBFv3_RS16355 and RALBFv3_RS16360 overlap by 4 nucleotides
RALBFv3_RS16360 and RALBFv3_RS16365 are separated by 12 nucleotides
RALBFv3_RS16365 and RALBFv3_RS16370 are separated by 228 nucleotides
RALBFv3_RS16350: RALBFv3_RS16350 - bb3-type cytochrome oxidase subunit IV, at 125,079 to 125,786
_RS16350
RALBFv3_RS16355: RALBFv3_RS16355 - cytochrome oxidase subunit III, at 125,783 to 126,394
_RS16355
RALBFv3_RS16360: RALBFv3_RS16360 - cytochrome c oxidase subunit I, at 126,391 to 128,151
_RS16360
RALBFv3_RS16365: RALBFv3_RS16365 - cytochrome B558 subunit A, at 128,164 to 129,318
_RS16365
RALBFv3_RS16370: RALBFv3_RS16370 - hypothetical protein, at 129,547 to 130,059
_RS16370
Group
Condition
RALBFv3
_RS16350
RALBFv3
_RS16355
RALBFv3
_RS16360
RALBFv3
_RS16365
RALBFv3
_RS16370
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-3.4
-3.4
-3.3
-3.1
-2.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-2.1
-1.6
-2.0
-2.2
-0.9
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-1.5
-2.8
-2.0
-1.8
-0.7
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-1.8
-3.0
-1.7
-1.8
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-2.2
-1.5
-1.6
-1.2
-0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-1.3
-1.4
-1.2
-1.4
-0.4
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.7
-0.3
-0.4
-0.4
-0.3
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-1.0
+0.0
-0.1
+0.0
-0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.5
+0.5
+0.0
-0.1
-1.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.6
+0.4
-0.2
+0.2
-1.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.0
+0.2
-0.1
-0.2
-0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.3
+0.2
-0.1
-0.2
-0.7
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.5
+0.4
-0.1
-0.0
-0.9
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+0.7
-0.1
-0.2
-1.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.6
+0.3
-0.1
-0.1
-0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.4
+0.4
-0.2
-0.1
-0.5
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.7
+0.6
-0.0
-0.3
-0.5
m63_quarter_strength
M63_quarter_strength
-0.3
+0.3
-0.1
-0.2
-0.5
cpg no stress control
CPG no stress control
-0.1
+0.4
-0.2
-0.1
-0.7
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.7
-0.1
-0.1
-0.8
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.6
-0.2
-0.2
+0.4
+0.2
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.0
+0.4
-0.1
+0.2
-1.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
+1.4
-0.1
-0.2
-0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
+1.4
-0.2
-0.4
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.9
+1.3
-0.0
-0.1
-0.4
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.7
-0.0
-0.1
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.4
+1.3
+0.1
-0.2
-0.2
in planta
tomato xylem local (total stem)
+0.4
+0.8
-0.1
+0.4
-0.6
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.0
+0.5
-0.1
-0.1
+0.6
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.3
+0.4
+0.1
-0.4
+1.2
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RALBFv3_RS16350
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RALBFv3_RS16355
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RALBFv3_RS16360
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RALBFv3_RS16365
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RALBFv3_RS16370
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