Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS16120 and RALBFv3_RS16125 are separated by 82 nucleotidesRALBFv3_RS16125 and RALBFv3_RS16130 are separated by 153 nucleotidesRALBFv3_RS16130 and RALBFv3_RS16135 are separated by 159 nucleotidesRALBFv3_RS16135 and RALBFv3_RS16140 overlap by 32 nucleotides RALBFv3_RS16120: RALBFv3_RS16120 - transcriptional regulator, at 58,093 to 58,722 _RS16120 RALBFv3_RS16125: RALBFv3_RS16125 - GntR family transcriptional regulator, at 58,805 to 59,851 _RS16125 RALBFv3_RS16130: RALBFv3_RS16130 - altronate dehydratase, at 60,005 to 61,564 _RS16130 RALBFv3_RS16135: RALBFv3_RS16135 - MFS transporter, at 61,724 to 63,070 _RS16135 RALBFv3_RS16140: RALBFv3_RS16140 - 4-hydroxy-2-oxoheptanedioate aldolase, at 63,039 to 63,833 _RS16140
Group Condition RALBFv3_RS16120 RALBFv3_RS16125 RALBFv3_RS16130 RALBFv3_RS16135 RALBFv3_RS16140
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -1.8 +0.0 -0.0 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.2 -0.1 -0.0 -0.1 -0.3
cpg CPG -0.3 -1.0 -0.1 -0.1 -0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 -2.3 +0.2 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -1.5 +0.0 -0.3 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -1.5 +0.1 -0.3 +0.3
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.3 +0.1 +0.0 +0.0
cpg CPG -0.4 -0.7 -0.2 -0.0 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.0 -1.0 -0.1 -0.2 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.0 -1.3 +0.0 -0.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.3 +0.3 -0.1 +0.4
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 -0.9 +0.1 -0.1 +0.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -1.1 +0.2 -0.3 +0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 -0.7 -0.0 +0.0 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.0 +0.2 -0.3 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.0 -0.2 -0.2 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.6 +0.0 -0.0 +1.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.5 +0.2 -0.1 +0.6
in planta tomato xylem local (total stem) -0.4 +0.4 +0.1 -0.3 +0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.6 +0.1 +0.1 -0.4
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.4 +0.4 -0.0 +0.5 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.3 +0.9 -0.3 -0.1 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 +1.0 +0.0 +0.0 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.6 +0.2 -0.2 +1.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +0.8 +0.1 +0.1 -0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.0 +1.1 -0.2 -0.0 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 +1.0 +0.1 -0.0 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.0 +0.2 -0.1 +1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.2 +0.2 -0.1 +1.2
in planta tomato xylem local (total stem) +0.1 +0.7 +0.4 +0.0 +1.4
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