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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS15720 and RALBFv3_RS15725 are separated by 146 nucleotides
RALBFv3_RS15725 and RALBFv3_RS15730 are separated by 42 nucleotides
RALBFv3_RS15730 and RALBFv3_RS15735 are separated by 83 nucleotides
RALBFv3_RS15735 and RALBFv3_RS15740 are separated by 58 nucleotides
RALBFv3_RS15720: RALBFv3_RS15720 - sterol desaturase family protein, at 3,428,685 to 3,429,578
_RS15720
RALBFv3_RS15725: RALBFv3_RS15725 - enoyl-CoA hydratase/isomerase family protein, at 3,429,725 to 3,430,843
_RS15725
RALBFv3_RS15730: RALBFv3_RS15730 - tRNA dihydrouridine(20/20a) synthase DusA, at 3,430,886 to 3,431,920
_RS15730
RALBFv3_RS15735: RALBFv3_RS15735 - tRNA-His, at 3,432,004 to 3,432,079
_RS15735
RALBFv3_RS15740: RALBFv3_RS15740 - hypothetical protein, at 3,432,138 to 3,432,530
_RS15740
Group
Condition
RALBFv3
_RS15720
RALBFv3
_RS15725
RALBFv3
_RS15730
RALBFv3
_RS15735
RALBFv3
_RS15740
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
-0.2
-2.5
N.D.
-0.3
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.1
-0.5
-2.4
N.D.
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.1
-0.4
-0.9
N.D.
-1.6
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.4
-0.5
-0.4
N.D.
-1.5
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
-0.9
-1.1
N.D.
+0.0
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.1
-1.9
-0.1
N.D.
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-0.8
-0.2
N.D.
-0.9
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-1.3
-0.4
N.D.
+0.0
cpg
CPG
-0.1
-1.2
-0.9
N.D.
+0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.2
+0.7
-1.1
N.D.
-1.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+0.0
-1.6
N.D.
+0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
-0.4
+0.0
-1.3
N.D.
+0.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.0
-1.1
-0.6
N.D.
+0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
+0.4
-1.4
N.D.
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.3
+0.6
-1.5
N.D.
-0.2
in planta
tomato xylem local (total stem)
+0.1
-1.3
-0.6
N.D.
+0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.1
-0.1
-1.2
N.D.
+0.3
cpg no stress control
CPG no stress control
+0.1
+0.7
-1.3
N.D.
-0.3
in planta
tomato xylem local (total stem)
+0.3
+0.3
-1.0
N.D.
+0.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.2
+0.4
-0.6
N.D.
+0.4
m63_quarter_strength
M63_quarter_strength
-0.4
-0.7
+1.1
N.D.
+0.2
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.0
+1.4
+0.2
N.D.
-0.8
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.8
+1.4
N.D.
+0.5
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.3
-0.0
+1.5
N.D.
-0.1
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.1
-0.3
N.D.
+1.5
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.2
+0.6
+1.0
N.D.
+0.0
in planta
tomato xylem local (total stem)
-0.3
+1.0
+1.4
N.D.
-0.3
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.1
+1.5
+1.0
N.D.
-0.4
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
+2.1
-0.5
N.D.
+0.4
cpg
CPG
+0.0
+0.9
+1.0
N.D.
+0.2
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