Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS15550 and RALBFv3_RS15555 are separated by 199 nucleotidesRALBFv3_RS15555 and RALBFv3_RS15560 are separated by 73 nucleotidesRALBFv3_RS15560 and RALBFv3_RS15565 are separated by 11 nucleotidesRALBFv3_RS15565 and RALBFv3_RS15570 are separated by 37 nucleotides RALBFv3_RS15550: RALBFv3_RS15550 - HAD family hydrolase, at 3,387,419 to 3,388,306 _RS15550 RALBFv3_RS15555: RALBFv3_RS15555 - sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB, at 3,388,506 to 3,389,822 _RS15555 RALBFv3_RS15560: RALBFv3_RS15560 - sn-glycerol-3-phosphate ABC transporter permease UgpA, at 3,389,896 to 3,390,777 _RS15560 RALBFv3_RS15565: RALBFv3_RS15565 - sn-glycerol-3-phosphate ABC transporter permease UgpE, at 3,390,789 to 3,391,637 _RS15565 RALBFv3_RS15570: RALBFv3_RS15570 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 3,391,675 to 3,392,772 _RS15570
Group Condition RALBFv3_RS15550 RALBFv3_RS15555 RALBFv3_RS15560 RALBFv3_RS15565 RALBFv3_RS15570
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -1.9 -0.2 +0.2 -0.8 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 +0.5 -0.3 -0.2 -0.4
in planta tomato xylem local (total stem) -2.2 +0.1 +0.1 -0.5 +0.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.2 -0.2 +0.1 -0.0 +0.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 +0.1 +0.0 -0.6 +0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 -0.7 -0.4 -0.3 +0.0
smsa no antibiotic control SMSA no antibiotic control -0.9 -0.0 +0.1 -0.4 +0.3
in planta tomato xylem local (total stem) -0.2 -0.4 +0.4 -0.5 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.4 -0.2 +0.0 -0.6 +0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.5 +0.0 +0.1 -0.2 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -0.2 +0.1 -0.4 +0.6
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -0.2 +0.2 -0.1 +0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 -0.3 -0.1 -0.8 +0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.1 +0.1 -0.2 +0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.1 +0.0 +0.1 -0.0 +0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.0 -0.1 +0.1 -0.1 +1.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.1 +0.5 -0.1 +0.2 +0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 -0.3 +0.3 -0.3 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.4 +0.2 -0.5 +0.5
in planta tomato xylem local (total stem) -0.6 +0.1 -0.2 -0.2 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.4 +0.1 -0.6 +0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.1 +0.3 -0.1 +0.7
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 -0.4 +0.0 -0.4 +0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.4 -0.1 -0.1 -0.4 +0.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.0 -0.1 -0.5 +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.5 -0.0 -0.2 -0.5 +0.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.4 +0.4 -0.0 +0.2 +0.5
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.4 -0.2 +0.8 +0.0
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.4 -0.3 -0.0 -0.1 +1.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.7 -0.2 -0.3 +0.4 +1.2
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