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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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500 nt
RALBFv3_RS15385 and RALBFv3_RS15390 are separated by 111 nucleotides
RALBFv3_RS15390 and RALBFv3_RS15395 are separated by 35 nucleotides
RALBFv3_RS15395 and RALBFv3_RS15400 are separated by 167 nucleotides
RALBFv3_RS15400 and RALBFv3_RS15405 overlap by 4 nucleotides
RALBFv3_RS15385: RALBFv3_RS15385 - oxidative damage protection protein, at 3,350,276 to 3,350,551
_RS15385
RALBFv3_RS15390: RALBFv3_RS15390 - oxidoreductase, at 3,350,663 to 3,351,736
_RS15390
RALBFv3_RS15395: RALBFv3_RS15395 - MurR/RpiR family transcriptional regulator, at 3,351,772 to 3,352,689
_RS15395
RALBFv3_RS15400: RALBFv3_RS15400 - pyridine nucleotide-disulfide oxidoreductase, at 3,352,857 to 3,354,146
_RS15400
RALBFv3_RS15405: RALBFv3_RS15405 - hypothetical protein, at 3,354,143 to 3,355,180
_RS15405
Group
Condition
RALBFv3
_RS15385
RALBFv3
_RS15390
RALBFv3
_RS15395
RALBFv3
_RS15400
RALBFv3
_RS15405
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-2.3
-0.4
-0.2
-0.3
in planta
tomato xylem local (total stem)
N.D.
-2.0
-0.2
+0.0
-0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-2.1
+0.3
-0.5
-0.0
in planta
tomato xylem local (total stem)
N.D.
-1.9
+0.8
+0.0
-1.0
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
-1.6
-0.0
-0.2
-0.3
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
N.D.
-1.3
-0.2
-0.1
-0.3
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.6
-0.0
+0.2
-0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-0.9
+0.2
-0.1
-0.5
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.2
-0.1
-0.3
+0.3
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
-1.3
+0.7
-0.4
-0.1
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.5
+0.1
-0.3
+0.5
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
-0.8
+0.4
-0.2
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.2
-0.3
+0.4
+0.2
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+0.8
-0.0
-0.1
-1.3
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.8
+0.4
-0.0
+0.2
in planta
tomato xylem local (total stem)
N.D.
+0.7
+0.1
-0.7
+0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
-1.0
+1.2
+0.1
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+1.1
-0.3
-0.2
-0.2
cpg no stress control
CPG no stress control
N.D.
+0.8
+0.5
-0.3
-0.3
m63_quarter_strength
M63_quarter_strength
N.D.
-1.6
+1.8
+0.4
+0.3
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
+1.0
-0.1
+0.2
-0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
+0.9
+0.4
+0.3
-0.6
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+1.1
-0.0
+0.6
-0.5
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+1.9
-0.5
+0.2
-0.2
m63_quarter_strength
M63_quarter_strength
N.D.
-0.1
+0.9
+0.3
+0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
+0.1
+1.2
+0.1
+0.1
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+1.5
+0.2
+0.1
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
+1.5
+0.4
+0.1
-0.0
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
N.D.
+0.9
+0.5
+0.9
-0.3
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
+0.7
+0.9
+0.1
+0.9
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