Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS15385 and RALBFv3_RS15390 are separated by 111 nucleotidesRALBFv3_RS15390 and RALBFv3_RS15395 are separated by 35 nucleotidesRALBFv3_RS15395 and RALBFv3_RS15400 are separated by 167 nucleotidesRALBFv3_RS15400 and RALBFv3_RS15405 overlap by 4 nucleotides RALBFv3_RS15385: RALBFv3_RS15385 - oxidative damage protection protein, at 3,350,276 to 3,350,551 _RS15385 RALBFv3_RS15390: RALBFv3_RS15390 - oxidoreductase, at 3,350,663 to 3,351,736 _RS15390 RALBFv3_RS15395: RALBFv3_RS15395 - MurR/RpiR family transcriptional regulator, at 3,351,772 to 3,352,689 _RS15395 RALBFv3_RS15400: RALBFv3_RS15400 - pyridine nucleotide-disulfide oxidoreductase, at 3,352,857 to 3,354,146 _RS15400 RALBFv3_RS15405: RALBFv3_RS15405 - hypothetical protein, at 3,354,143 to 3,355,180 _RS15405
Group Condition RALBFv3_RS15385 RALBFv3_RS15390 RALBFv3_RS15395 RALBFv3_RS15400 RALBFv3_RS15405
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -2.3 -0.4 -0.2 -0.3
in planta tomato xylem local (total stem) N.D. -2.0 -0.2 +0.0 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -2.1 +0.3 -0.5 -0.0
in planta tomato xylem local (total stem) N.D. -1.9 +0.8 +0.0 -1.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -1.6 -0.0 -0.2 -0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -1.3 -0.2 -0.1 -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 -0.0 +0.2 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.9 +0.2 -0.1 -0.5
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 -0.1 -0.3 +0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -1.3 +0.7 -0.4 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.5 +0.1 -0.3 +0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -0.8 +0.4 -0.2 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 -0.3 +0.4 +0.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 -0.0 -0.1 -1.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 +0.4 -0.0 +0.2
in planta tomato xylem local (total stem) N.D. +0.7 +0.1 -0.7 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -1.0 +1.2 +0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.1 -0.3 -0.2 -0.2
cpg no stress control CPG no stress control N.D. +0.8 +0.5 -0.3 -0.3
m63_quarter_strength M63_quarter_strength N.D. -1.6 +1.8 +0.4 +0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +1.0 -0.1 +0.2 -0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. +0.9 +0.4 +0.3 -0.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.1 -0.0 +0.6 -0.5
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.9 -0.5 +0.2 -0.2
m63_quarter_strength M63_quarter_strength N.D. -0.1 +0.9 +0.3 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.1 +1.2 +0.1 +0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.5 +0.2 +0.1 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +1.5 +0.4 +0.1 -0.0
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. +0.9 +0.5 +0.9 -0.3
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. +0.7 +0.9 +0.1 +0.9
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