Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS14845 and RALBFv3_RS14850 overlap by 4 nucleotidesRALBFv3_RS14850 and RALBFv3_RS14855 overlap by 4 nucleotidesRALBFv3_RS14855 and RALBFv3_RS14860 are separated by 5 nucleotidesRALBFv3_RS14860 and RALBFv3_RS14865 are separated by 152 nucleotides RALBFv3_RS14845: RALBFv3_RS14845 - thiol-disulfide oxidoreductase DCC family protein, at 3,235,256 to 3,235,645 _RS14845 RALBFv3_RS14850: RALBFv3_RS14850 - DUF4166 domain-containing protein, at 3,235,642 to 3,236,184 _RS14850 RALBFv3_RS14855: RALBFv3_RS14855 - membrane protein, at 3,236,181 to 3,237,308 _RS14855 RALBFv3_RS14860: RALBFv3_RS14860 - NAD(P)/FAD-dependent oxidoreductase, at 3,237,314 to 3,238,393 _RS14860 RALBFv3_RS14865: RALBFv3_RS14865 - PHP domain-containing protein, at 3,238,546 to 3,239,406 _RS14865
Group Condition RALBFv3_RS14845 RALBFv3_RS14850 RALBFv3_RS14855 RALBFv3_RS14860 RALBFv3_RS14865
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 +0.1 +0.2 -1.9 -0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.1 +0.1 -0.4 -1.1 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 +0.0 -0.2 -1.0 +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 +0.1 -0.5 -0.3 +0.8
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.6 +0.3 -0.4 -0.8 +1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 -0.2 -0.8 +1.0 +0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.4 +0.4 -0.0 -1.2 +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.0 -0.2 +0.1 +0.4 +0.8
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.0 -0.9 -0.1 +1.4
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 -0.7 +1.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.1 -0.4 +0.5 +0.7
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +0.4 -0.3 -0.5 +1.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +1.0 -0.6 -0.4 +0.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.6 -0.7 +0.5 +0.8
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.3 +0.6 +0.2 -0.9 +0.7
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 +0.7 -0.3 +0.1 +1.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 -0.8 +0.5 +0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 +0.5 -0.3 +0.4 +0.9
stress SMSA with Ralstonia_antibiotic_mix -0.3 +0.7 -0.3 +0.7 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 +0.9 -0.1 +0.8 +0.2
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.6 +0.1 -0.3 +1.2 +1.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.5 -0.5 +1.0 +0.8
in planta tomato xylem local (total stem) +0.2 +0.4 -0.5 +0.9 +0.7
in planta tomato xylem local (total stem) -0.7 +0.7 -0.0 +0.2 +1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.4 -0.3 +1.4 +1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 +0.3 -0.3 +1.5 +1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 +0.6 -0.1 +1.3 +1.0
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 +0.4 +0.2 +0.9 +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 +0.4 -0.4 +1.7 +1.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.0 +0.9 -0.3 +1.0 +1.1
remove
RALBFv3_RS14845
plot		 remove
RALBFv3_RS14850
plot		 remove
RALBFv3_RS14855		 remove
RALBFv3_RS14860
plot		 remove
RALBFv3_RS14865
plot