Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS14565 and RALBFv3_RS14570 are separated by 30 nucleotidesRALBFv3_RS14570 and RALBFv3_RS14575 are separated by 418 nucleotidesRALBFv3_RS14575 and RALBFv3_RS14580 are separated by 106 nucleotidesRALBFv3_RS14580 and RALBFv3_RS14585 are separated by 78 nucleotides RALBFv3_RS14565: RALBFv3_RS14565 - DNA-binding response regulator, at 3,180,333 to 3,181,055 _RS14565 RALBFv3_RS14570: RALBFv3_RS14570 - GlsB/YeaQ/YmgE family stress response membrane protein, at 3,181,086 to 3,181,334 _RS14570 RALBFv3_RS14575: RALBFv3_RS14575 - FadR family transcriptional regulator, at 3,181,753 to 3,182,520 _RS14575 RALBFv3_RS14580: RALBFv3_RS14580 - glucarate dehydratase, at 3,182,627 to 3,183,979 _RS14580 RALBFv3_RS14585: RALBFv3_RS14585 - MFS transporter, at 3,184,058 to 3,185,356 _RS14585
Group Condition RALBFv3_RS14565 RALBFv3_RS14570 RALBFv3_RS14575 RALBFv3_RS14580 RALBFv3_RS14585
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 -1.0 +0.1 -0.3 -0.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -0.1 -0.3 +0.4 +0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.9 +0.4 -0.8 +0.3 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 +0.8 -0.2 -0.2 +0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 +0.3 +0.4 -0.1 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.9 -0.8 +0.1 +0.0 -0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.8 -0.6 -0.1 +0.4
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.7 +1.3 -0.6 -0.1 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 -0.8 +0.3 +0.3 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +1.2 -0.8 -0.1 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.0 +0.6 +0.3 +0.2 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.1 +0.9 +0.2 -0.4 -0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.9 +0.3 +0.2 +0.5 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +1.1 -0.2 +0.1 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +1.3 -0.6 +0.1 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +1.1 -0.5 -0.0 -0.0
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.2 +0.5 -0.4 +0.5 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +1.3 -0.4 -0.2 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +1.2 -0.5 +0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +1.3 -0.8 -0.5 +0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.3 -0.6 +0.2 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +1.1 -0.5 +0.0 +0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.7 +0.6 -0.4 +0.4 +1.0
in planta tomato xylem local (total stem) -0.1 +1.4 -0.4 -0.5 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +1.7 -0.8 +0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +1.2 -0.2 -0.5 +0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 +0.4 -0.1 -0.4 +0.1
in planta tomato xylem local (total stem) +0.5 +1.4 -0.6 -0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 +1.4 -0.9 -0.0 +0.2
in planta tomato xylem local (total stem) +1.2 +1.7 -0.6 -0.5 +0.5
remove
RALBFv3_RS14565
plot		 remove
RALBFv3_RS14570
plot		 remove
RALBFv3_RS14575		 remove
RALBFv3_RS14580
plot		 remove
RALBFv3_RS14585
plot