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Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS14355 and RALBFv3_RS14360 are separated by 27 nucleotides
RALBFv3_RS14360 and RALBFv3_RS14365 are separated by 21 nucleotides
RALBFv3_RS14365 and RALBFv3_RS14370 are separated by 193 nucleotides
RALBFv3_RS14370 and RALBFv3_RS14375 are separated by 715 nucleotides
RALBFv3_RS14355: RALBFv3_RS14355 - molybdopterin molybdenumtransferase MoeA, at 3,137,523 to 3,138,809
_RS14355
RALBFv3_RS14360: RALBFv3_RS14360 - molybdenum cofactor guanylyltransferase MobA, at 3,138,837 to 3,139,451
_RS14360
RALBFv3_RS14365: RALBFv3_RS14365 - GTP 3',8-cyclase MoaA, at 3,139,473 to 3,140,594
_RS14365
RALBFv3_RS14370: RALBFv3_RS14370 - ribonuclease E/G, at 3,140,788 to 3,143,829
_RS14370
RALBFv3_RS14375: RALBFv3_RS14375 - RluA family pseudouridine synthase, at 3,144,545 to 3,145,597
_RS14375
Group
Condition
RALBFv3
_RS14355
RALBFv3
_RS14360
RALBFv3
_RS14365
RALBFv3
_RS14370
RALBFv3
_RS14375
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.6
N.D.
-5.7
N.D.
-1.7
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.6
N.D.
-5.1
N.D.
-2.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.7
N.D.
-3.5
N.D.
-1.7
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.4
N.D.
-3.4
N.D.
-2.7
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.2
N.D.
-2.9
N.D.
-2.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.4
N.D.
-0.0
N.D.
-3.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.3
N.D.
-1.7
N.D.
-1.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.3
N.D.
-0.1
N.D.
-2.6
in planta
tomato xylem local (total stem)
-2.1
N.D.
-0.0
N.D.
-0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.7
N.D.
+0.2
N.D.
-3.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.2
N.D.
+0.1
N.D.
-1.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.4
N.D.
-0.1
N.D.
-0.5
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-1.6
N.D.
+0.1
N.D.
-0.3
in planta
tomato xylem local (total stem)
-1.1
N.D.
-0.1
N.D.
-0.6
stress
SMSA with Ralstonia_antibiotic_mix
-0.6
N.D.
-0.0
N.D.
-1.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.6
N.D.
+0.3
N.D.
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.1
N.D.
+0.3
N.D.
-1.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.3
N.D.
+0.3
N.D.
-2.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.3
N.D.
+0.1
N.D.
-1.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.2
N.D.
+0.3
N.D.
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.4
N.D.
+0.4
N.D.
-0.3
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-1.3
N.D.
+0.7
N.D.
-0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.3
N.D.
+0.1
N.D.
-1.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.6
N.D.
+0.1
N.D.
-1.7
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.1
N.D.
-1.2
N.D.
+0.6
stress
SMSA with Ralstonia_antibiotic_mix
+0.4
N.D.
+0.2
N.D.
-1.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.5
N.D.
+0.3
N.D.
-1.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.5
N.D.
+0.2
N.D.
-0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+1.2
N.D.
+0.3
N.D.
-1.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.7
N.D.
+0.4
N.D.
-0.6
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