Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS13955 and RALBFv3_RS13960 overlap by 4 nucleotidesRALBFv3_RS13960 and RALBFv3_RS13965 are separated by 84 nucleotidesRALBFv3_RS13965 and RALBFv3_RS13970 are separated by 67 nucleotidesRALBFv3_RS13970 and RALBFv3_RS13975 overlap by 4 nucleotides RALBFv3_RS13955: RALBFv3_RS13955 - molybdopterin adenylyltransferase, at 3,051,860 to 3,052,498 _RS13955 RALBFv3_RS13960: RALBFv3_RS13960 - DUF615 domain-containing protein, at 3,052,495 to 3,053,121 _RS13960 RALBFv3_RS13965: RALBFv3_RS13965 - metalloprotease PmbA, at 3,053,206 to 3,054,579 _RS13965 RALBFv3_RS13970: RALBFv3_RS13970 - dihydrofolate reductase, at 3,054,647 to 3,055,150 _RS13970 RALBFv3_RS13975: RALBFv3_RS13975 - thymidylate synthase, at 3,055,147 to 3,055,941 _RS13975
Group Condition RALBFv3_RS13955 RALBFv3_RS13960 RALBFv3_RS13965 RALBFv3_RS13970 RALBFv3_RS13975
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.9 -0.8 -1.4 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -2.5 -0.1 -1.9 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -2.2 -0.7 -1.3 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.4 +0.0 -1.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.1 -1.9 -0.6 N.D. N.D.
in planta tomato xylem local (total stem) -1.7 -1.0 -0.8 N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.7 -0.9 -0.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -0.9 -1.2 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.6 -0.3 -1.8 N.D. N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -1.0 -1.4 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.1 -0.2 -0.3 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -2.1 -0.4 -0.1 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.2 -0.2 -1.0 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 -0.1 -1.4 N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 -0.5 -0.5 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 -0.6 -0.7 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 -0.5 -0.9 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.5 -0.8 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -1.1 -0.2 N.D. N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.9 -0.8 N.D. N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.7 -0.5 -0.3 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.1 -0.4 +0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.5 -0.7 -0.2 N.D. N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.2 +0.1 -0.3 N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control -0.6 -1.0 +0.2 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.2 +0.2 -0.4 N.D. N.D.
in planta tomato xylem local (total stem) +0.3 -1.0 -0.4 N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -1.0 -0.1 N.D. N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 -0.4 -0.3 N.D. N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.9 +0.4 -0.3 N.D. N.D.
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