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Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS13910 and RALBFv3_RS13915 are separated by 23 nucleotides
RALBFv3_RS13915 and RALBFv3_RS13920 are separated by 73 nucleotides
RALBFv3_RS13920 and RALBFv3_RS13925 are separated by 111 nucleotides
RALBFv3_RS13925 and RALBFv3_RS13930 are separated by 95 nucleotides
RALBFv3_RS13910: RALBFv3_RS13910 - ribosome maturation factor RimM, at 3,044,831 to 3,045,472
_RS13910
RALBFv3_RS13915: RALBFv3_RS13915 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 3,045,496 to 3,046,284
_RS13915
RALBFv3_RS13920: RALBFv3_RS13920 - 50S ribosomal protein L19, at 3,046,358 to 3,046,744
_RS13920
RALBFv3_RS13925: RALBFv3_RS13925 - CoA pyrophosphatase, at 3,046,856 to 3,047,539
_RS13925
RALBFv3_RS13930: RALBFv3_RS13930 - cobalamin biosynthesis protein CobD, at 3,047,635 to 3,048,576
_RS13930
Group
Condition
RALBFv3
_RS13910
RALBFv3
_RS13915
RALBFv3
_RS13920
RALBFv3
_RS13925
RALBFv3
_RS13930
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
N.D.
-0.6
-3.7
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
N.D.
N.D.
-0.9
-2.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
N.D.
N.D.
N.D.
-0.0
-3.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
N.D.
N.D.
N.D.
-0.2
-2.9
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
N.D.
N.D.
-0.6
-2.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
N.D.
N.D.
N.D.
+0.1
-3.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
N.D.
N.D.
N.D.
-0.1
-2.8
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
N.D.
+0.6
-3.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
N.D.
N.D.
N.D.
-0.0
-2.6
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
N.D.
+0.4
-3.0
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
N.D.
+0.4
-2.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
N.D.
N.D.
N.D.
-0.1
-2.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
N.D.
N.D.
N.D.
+0.1
-2.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
N.D.
N.D.
N.D.
-0.0
-2.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
N.D.
N.D.
N.D.
+0.1
-2.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
N.D.
+0.4
-2.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
N.D.
N.D.
N.D.
+0.2
-2.1
m63_quarter_strength
M63_quarter_strength
N.D.
N.D.
N.D.
-0.1
-1.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
N.D.
N.D.
N.D.
+0.1
-1.8
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
N.D.
N.D.
-0.1
-1.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
N.D.
N.D.
N.D.
-0.1
-1.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
N.D.
N.D.
N.D.
-0.1
-1.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
N.D.
+0.1
-1.5
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
N.D.
N.D.
N.D.
-0.0
-1.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
N.D.
N.D.
N.D.
+0.0
-1.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
N.D.
N.D.
N.D.
+0.0
-1.2
stress
SMSA with Ralstonia_antibiotic_mix
N.D.
N.D.
N.D.
-0.2
-0.9
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
N.D.
N.D.
N.D.
-0.9
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
N.D.
N.D.
N.D.
+0.2
-0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
N.D.
-0.3
+0.8
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