Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS12930 and RALBFv3_RS12935 are separated by 69 nucleotidesRALBFv3_RS12935 and RALBFv3_RS12940 are separated by 162 nucleotidesRALBFv3_RS12940 and RALBFv3_RS12945 are separated by 17 nucleotidesRALBFv3_RS12945 and RALBFv3_RS12950 are separated by 61 nucleotides RALBFv3_RS12930: RALBFv3_RS12930 - peptidoglycan-associated lipoprotein, at 2,841,930 to 2,842,448 _RS12930 RALBFv3_RS12935: RALBFv3_RS12935 - tol-pal system protein YbgF, at 2,842,518 to 2,843,291 _RS12935 RALBFv3_RS12940: RALBFv3_RS12940 - 7-cyano-7-deazaguanine synthase QueC, at 2,843,454 to 2,844,128 _RS12940 RALBFv3_RS12945: RALBFv3_RS12945 - YeeE/YedE family protein, at 2,844,146 to 2,845,261 _RS12945 RALBFv3_RS12950: RALBFv3_RS12950 - tRNA-Lys, at 2,845,323 to 2,845,398 _RS12950
Group Condition RALBFv3_RS12930 RALBFv3_RS12935 RALBFv3_RS12940 RALBFv3_RS12945 RALBFv3_RS12950
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.8 -0.7 -2.6 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.8 -0.8 -2.2 -0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.1 -0.7 -2.6 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.5 -0.3 -1.1 -0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.8 -0.2 -1.7 -0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.7 -0.4 -2.3 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 -1.0 -2.5 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 -0.7 -2.5 -0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.3 -0.5 -2.8 +0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.6 -0.6 -2.3 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.7 -0.8 -1.5 -0.5 N.D.
cpg CPG -1.5 -0.6 -1.3 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.9 +0.1 -1.5 -0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.9 -0.0 -2.0 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.6 -0.8 -1.1 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -1.6 -0.2 -1.8 +0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.9 -1.0 -1.4 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.8 -0.3 -2.2 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -1.1 -0.7 -1.5 -0.1 N.D.
cpg no stress control CPG no stress control -0.7 -0.4 -2.0 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -1.7 -0.5 -0.8 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.7 -0.1 -2.1 -0.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.6 -0.3 -1.2 +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.4 +0.5 -2.4 +0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.6 +0.4 -2.1 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.5 -0.3 -1.4 +0.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.6 +0.2 -1.3 +0.1 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -2.1 +0.1 -0.7 +0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 +0.5 -2.8 +0.3 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 -1.2 +0.8 -0.3 N.D.
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RALBFv3_RS12930
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RALBFv3_RS12935
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