Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RALBFv3_RS12915	RALBFv3_RS12920	RALBFv3_RS12925	RALBFv3_RS12930	RALBFv3_RS12935
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-2.4	-3.8	-0.7
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-2.4	-3.5	-0.3
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi	N.D.	N.D.	-3.2	-2.1	-0.6
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-1.6	-2.8	-0.8
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-3.6	-1.2	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	N.D.	N.D.	-2.4	-2.0	-0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	N.D.	N.D.	-1.9	-1.6	-0.8
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-1.2	-2.8	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	N.D.	N.D.	-1.9	-1.7	-0.5
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-1.2	-2.1	-0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	N.D.	N.D.	-1.8	-1.5	-0.6
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-1.4	-1.7	-0.8
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	N.D.	N.D.	-2.2	-1.9	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	N.D.	-2.1	-1.7	-0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	N.D.	-1.9	-1.7	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	N.D.	N.D.	-2.2	-0.8	-0.8
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-1.6	-1.4	-0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	N.D.	N.D.	-1.8	-1.6	-0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	N.D.	N.D.	-1.9	-1.3	-0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	N.D.	-1.9	-1.6	-0.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-1.6	-1.7	-0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	N.D.	-1.9	-1.1	-0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	N.D.	N.D.	-1.6	-1.4	-0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	N.D.	N.D.	-1.8	-1.9	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	N.D.	-1.4	-1.3	-1.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	N.D.	N.D.	-1.6	-0.9	-1.0
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	N.D.	N.D.	-1.7	-1.3	-0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	N.D.	-1.9	-0.8	-0.9
smsa no antibiotic control	SMSA no antibiotic control	N.D.	N.D.	-1.6	-1.5	-0.5
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	N.D.	N.D.	-1.9	-1.4	+0.5