Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS12785 and RALBFv3_RS12790 are separated by 116 nucleotidesRALBFv3_RS12790 and RALBFv3_RS12795 are separated by 536 nucleotidesRALBFv3_RS12795 and RALBFv3_RS12800 are separated by 76 nucleotidesRALBFv3_RS12800 and RALBFv3_RS12805 are separated by 47 nucleotides RALBFv3_RS12785: RALBFv3_RS12785 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,812,298 to 2,813,815 _RS12785 RALBFv3_RS12790: RALBFv3_RS12790 - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 2,813,932 to 2,815,443 _RS12790 RALBFv3_RS12795: RALBFv3_RS12795 - lytic transglycosylase, at 2,815,980 to 2,817,197 _RS12795 RALBFv3_RS12800: RALBFv3_RS12800 - pyridoxal phosphate-dependent aminotransferase, at 2,817,274 to 2,818,458 _RS12800 RALBFv3_RS12805: RALBFv3_RS12805 - transcription antitermination factor NusB, at 2,818,506 to 2,818,973 _RS12805
Group Condition RALBFv3_RS12785 RALBFv3_RS12790 RALBFv3_RS12795 RALBFv3_RS12800 RALBFv3_RS12805
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.2 N.D. -2.2 -0.8 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.3 N.D. -1.0 -0.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 N.D. -1.2 -0.1 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 N.D. -0.4 -0.8 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.1 N.D. -1.0 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 N.D. -0.5 -0.3 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 N.D. -0.5 -0.4 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -0.3 -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix -0.2 N.D. -0.7 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 N.D. -0.8 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 N.D. -0.6 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.0 N.D. -0.9 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 N.D. +0.2 -0.8 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 N.D. -0.1 -0.1 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.2 N.D. -0.7 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.0 N.D. -0.5 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 N.D. -0.8 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.0 N.D. -0.9 +0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 N.D. -0.8 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 N.D. -0.8 +0.2 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.6 N.D. +0.5 -0.1 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 N.D. +0.7 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 N.D. +0.5 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.0 N.D. +0.6 -0.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.0 N.D. +0.7 -0.2 N.D.
in planta tomato xylem local (total stem) -0.4 N.D. -0.4 +1.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 N.D. +0.8 +0.0 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. +1.1 +0.0 N.D.
m63_quarter_strength M63_quarter_strength +0.3 N.D. +1.1 -0.3 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 N.D. +1.8 -0.1 N.D.
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RALBFv3_RS12785
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RALBFv3_RS12790
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RALBFv3_RS12800
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RALBFv3_RS12805
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