Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS12720 and RALBFv3_RS12725 are separated by 27 nucleotidesRALBFv3_RS12725 and RALBFv3_RS12730 are separated by 35 nucleotidesRALBFv3_RS12730 and RALBFv3_RS24015 overlap by 4 nucleotidesRALBFv3_RS24015 and RALBFv3_RS12735 overlap by 35 nucleotides RALBFv3_RS12720: RALBFv3_RS12720 - sulfurtransferase, at 2,802,848 to 2,803,180 _RS12720 RALBFv3_RS12725: RALBFv3_RS12725 - protein-L-isoaspartate O-methyltransferase, at 2,803,208 to 2,803,909 _RS12725 RALBFv3_RS12730: RALBFv3_RS12730 - TetR/AcrR family transcriptional regulator, at 2,803,945 to 2,804,739 _RS12730 RALBFv3_RS24015: RALBFv3_RS24015 - hypothetical protein, at 2,804,736 to 2,804,915 _RS24015 RALBFv3_RS12735: RALBFv3_RS12735 - YkgJ family cysteine cluster protein, at 2,804,881 to 2,805,138 _RS12735
Group Condition RALBFv3_RS12720 RALBFv3_RS12725 RALBFv3_RS12730 RALBFv3_RS24015 RALBFv3_RS12735
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -5.1 +0.1 +0.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.0 -4.5 +0.0 +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.4 -1.4 -0.0 -0.5 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 -1.8 +0.3 -0.4 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.9 -0.8 +0.2 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.3 -0.7 +1.1 -0.8 N.D.
cpg CPG -0.6 -0.9 -0.1 -0.2 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.7 +0.2 -0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 -0.7 +0.4 -0.2 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 -0.6 +0.1 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix -0.5 -0.8 +0.2 -0.2 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 +0.2 +0.2 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.9 +0.8 -0.7 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.5 +0.2 +0.1 +0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -1.3 +1.1 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -1.2 +0.7 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.2 +0.8 -0.8 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.6 -0.8 -0.1 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.4 +0.5 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.9 +0.6 -0.2 N.D.
in planta tomato xylem local (total stem) -1.9 +0.3 +0.3 +0.6 N.D.
in planta tomato xylem local (total stem) -0.3 -0.7 +0.5 -0.1 N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.9 -0.1 +0.9 -0.4 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.9 +0.6 +0.0 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.9 +0.4 -0.1 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.5 +0.7 -0.2 -0.2 N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.8 +0.6 -0.1 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +1.1 +0.3 +0.3 -0.3 N.D.
in planta tomato xylem local (total stem) +0.8 +1.2 +0.6 +0.3 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +1.0 +0.9 +1.6 N.D.
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RALBFv3_RS12720
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RALBFv3_RS12725
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RALBFv3_RS24015
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RALBFv3_RS12735
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