Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS12705 and RALBFv3_RS12710 are separated by 102 nucleotidesRALBFv3_RS12710 and RALBFv3_RS12715 are separated by 10 nucleotidesRALBFv3_RS12715 and RALBFv3_RS12720 are separated by 69 nucleotidesRALBFv3_RS12720 and RALBFv3_RS12725 are separated by 27 nucleotides RALBFv3_RS12705: RALBFv3_RS12705 - 3-deoxy-D-manno-octulosonic acid transferase, at 2,799,178 to 2,800,494 _RS12705 RALBFv3_RS12710: RALBFv3_RS12710 - META domain-containing protein, at 2,800,597 to 2,801,313 _RS12710 RALBFv3_RS12715: RALBFv3_RS12715 - channel protein TolC, at 2,801,324 to 2,802,778 _RS12715 RALBFv3_RS12720: RALBFv3_RS12720 - sulfurtransferase, at 2,802,848 to 2,803,180 _RS12720 RALBFv3_RS12725: RALBFv3_RS12725 - protein-L-isoaspartate O-methyltransferase, at 2,803,208 to 2,803,909 _RS12725
Group Condition RALBFv3_RS12705 RALBFv3_RS12710 RALBFv3_RS12715 RALBFv3_RS12720 RALBFv3_RS12725
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.3 -0.6 +0.0 -4.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.4 -0.4 +0.2 -5.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 -1.7 -0.4 -0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -1.4 -0.7 -0.2 -1.8
in planta tomato xylem local (total stem) N.D. -1.1 -1.1 -1.9 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.8 -1.1 -1.3 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.1 -0.9 -0.2 -1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 -1.6 -0.7 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.6 -0.8 -0.7 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 -1.3 -0.3 -0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.4 -0.9 -0.4 -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.9 -0.9 -0.7
cpg CPG N.D. -0.8 -0.8 -0.6 -0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -0.3 -0.6 -0.9 -0.8
in planta tomato xylem local (total stem) N.D. -1.1 -0.5 -0.3 -0.7
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.0 -0.6 -0.0 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -1.0 -0.5 -0.6 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.6 -1.1 -0.4 -0.4
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 -0.5 -1.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.1 -1.5 -0.4 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -1.6 -0.6 -0.2 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -1.0 -0.3 -0.6 -0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 -0.6 +0.3 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 -1.1 +0.2 -0.6
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.6 -0.3 -1.1 +0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 +0.4 +0.4 -0.8
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 -0.1 -0.2 +1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. -0.8 -0.0 +1.1 +0.3
in planta tomato xylem local (total stem) N.D. -0.5 -0.7 +0.8 +1.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. +1.2 +0.9 +0.3 -0.5
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