Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS12575 and RALBFv3_RS12580 are separated by 31 nucleotidesRALBFv3_RS12580 and RALBFv3_RS12585 are separated by 58 nucleotidesRALBFv3_RS12585 and RALBFv3_RS12590 are separated by 248 nucleotidesRALBFv3_RS12590 and RALBFv3_RS12595 are separated by 78 nucleotides RALBFv3_RS12575: RALBFv3_RS12575 - response regulator, at 2,768,466 to 2,768,933 _RS12575 RALBFv3_RS12580: RALBFv3_RS12580 - response regulator, at 2,768,965 to 2,769,333 _RS12580 RALBFv3_RS12585: RALBFv3_RS12585 - chemotaxis protein CheW, at 2,769,392 to 2,769,937 _RS12585 RALBFv3_RS12590: RALBFv3_RS12590 - chemotaxis protein, at 2,770,186 to 2,772,417 _RS12590 RALBFv3_RS12595: RALBFv3_RS12595 - hybrid sensor histidine kinase/response regulator, at 2,772,496 to 2,778,615 _RS12595
Group Condition RALBFv3_RS12575 RALBFv3_RS12580 RALBFv3_RS12585 RALBFv3_RS12590 RALBFv3_RS12595
cpg CPG -3.1 -3.1 N.D. -1.9 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.6 -1.7 N.D. -1.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -2.1 N.D. -1.7 +0.1
cpg CPG -1.9 -1.5 N.D. -0.8 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 -1.7 N.D. -0.9 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -2.4 N.D. -1.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -2.2 N.D. -0.8 +0.1
cpg CPG -1.1 -1.1 N.D. -1.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.1 -1.2 N.D. -0.9 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.9 -1.1 N.D. -0.5 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.8 -1.2 N.D. -0.3 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 -0.9 N.D. -0.8 -0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -2.4 N.D. +0.3 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.2 -1.1 N.D. -0.6 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.7 -0.8 N.D. -0.3 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -1.6 N.D. -0.8 +0.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.2 -1.0 N.D. -0.5 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 -0.9 N.D. -0.5 -0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 -0.2 N.D. +0.2 +0.4
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.6 -1.6 N.D. -0.1 -0.2
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -1.4 N.D. +0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 +0.6 N.D. +0.4 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +0.7 N.D. +1.0 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.1 +1.4 N.D. +0.6 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.5 +1.1 N.D. +0.4 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 +0.7 N.D. +0.9 +0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.2 +1.2 N.D. +1.2 +0.5
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.8 +0.9 N.D. +0.8 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.7 +1.3 N.D. +0.9 +0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +1.3 +1.0 N.D. +1.5 +0.5
remove
RALBFv3_RS12575
plot		 remove
RALBFv3_RS12580
plot		 remove
RALBFv3_RS12585		 remove
RALBFv3_RS12590
plot		 remove
RALBFv3_RS12595
plot