Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS11870 and RALBFv3_RS11875 are separated by 683 nucleotidesRALBFv3_RS11875 and RALBFv3_RS11880 are separated by 5 nucleotidesRALBFv3_RS11880 and RALBFv3_RS11885 are separated by 49 nucleotidesRALBFv3_RS11885 and RALBFv3_RS11890 are separated by 153 nucleotides RALBFv3_RS11870: RALBFv3_RS11870 - TetR/AcrR family transcriptional regulator, at 2,614,607 to 2,615,656 _RS11870 RALBFv3_RS11875: RALBFv3_RS11875 - RNA helicase, at 2,616,340 to 2,617,989 _RS11875 RALBFv3_RS11880: RALBFv3_RS11880 - serine/threonine protein kinase, at 2,617,995 to 2,619,038 _RS11880 RALBFv3_RS11885: RALBFv3_RS11885 - pirin family protein, at 2,619,088 to 2,619,984 _RS11885 RALBFv3_RS11890: RALBFv3_RS11890 - LysR family transcriptional regulator, at 2,620,138 to 2,621,055 _RS11890
Group Condition RALBFv3_RS11870 RALBFv3_RS11875 RALBFv3_RS11880 RALBFv3_RS11885 RALBFv3_RS11890
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.4 +0.0 -0.4 +0.4 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.5 +0.1 +0.0 -0.3 -0.9
cpg CPG +0.2 -0.5 +0.1 +0.1 -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 +0.1 +0.1 -0.3 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 +0.7 +0.2 -0.4 -1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +1.1 +0.2 -0.6 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 +0.9 -0.1 +0.2 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.5 +1.3 +0.2 -0.5 -0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +0.9 +0.1 +0.1 -0.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 +1.3 +0.2 -0.2 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 +1.5 +0.0 +0.1 -0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.8 +0.0 +0.3 -0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.7 +0.1 +0.4 -0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.9 -0.2 +0.2 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.5 +1.4 +0.2 -0.1 +0.1
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.2 +1.3 +0.0 +0.2 -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 +1.2 -0.1 +0.4 -0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.8 +0.3 +0.3 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +1.5 +0.1 +0.0 -0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +1.8 -0.1 +0.0 -0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.3 +0.6 +0.4 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +1.2 +0.1 +0.1 +0.4
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 +0.7 +0.4 +0.3 +0.2
in planta tomato xylem local (total stem) +0.3 +0.8 +0.2 +0.2 +0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 +1.4 +0.1 -0.1 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +1.1 +0.0 +0.4 +0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +1.4 +0.1 +0.2 +0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.2 +2.1 +0.1 -0.0 -0.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.1 +2.3 +0.0 +0.2 +0.3
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.4 +4.0 -0.0 +0.5 +0.2
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