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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS11135 and RALBFv3_RS11140 are separated by 29 nucleotides
RALBFv3_RS11140 and RALBFv3_RS11145 are separated by 77 nucleotides
RALBFv3_RS11145 and RALBFv3_RS11150 are separated by 93 nucleotides
RALBFv3_RS11150 and RALBFv3_RS11155 are separated by 190 nucleotides
RALBFv3_RS11135: RALBFv3_RS11135 - A/G-specific adenine glycosylase, at 2,457,691 to 2,458,839
_RS11135
RALBFv3_RS11140: RALBFv3_RS11140 - ATP-dependent protease, at 2,458,869 to 2,459,522
_RS11140
RALBFv3_RS11145: RALBFv3_RS11145 - RNase adapter RapZ, at 2,459,600 to 2,460,490
_RS11145
RALBFv3_RS11150: RALBFv3_RS11150 - hypothetical protein, at 2,460,584 to 2,460,916
_RS11150
RALBFv3_RS11155: RALBFv3_RS11155 - HPr kinase/phosphorylase, at 2,461,107 to 2,462,081
_RS11155
Group
Condition
RALBFv3
_RS11135
RALBFv3
_RS11140
RALBFv3
_RS11145
RALBFv3
_RS11150
RALBFv3
_RS11155
m63_quarter_strength
M63_quarter_strength
+0.1
-0.2
-3.5
-0.4
N.D.
in planta
tomato xylem local (total stem)
-1.1
+0.3
-0.0
-2.6
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.0
-0.3
-1.8
-1.3
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.2
-0.4
-1.8
-0.9
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.3
-2.5
-0.9
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.7
-2.7
-0.9
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
-0.0
-1.3
-1.0
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
-0.1
-0.7
-1.8
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.4
+0.3
-2.0
-1.3
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.1
+0.2
-2.8
+0.1
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.2
+0.4
-1.5
-1.2
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.1
+0.2
-2.6
-0.2
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
+0.3
-1.7
-0.6
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.3
+0.2
-2.5
-0.4
N.D.
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.3
+0.4
-1.6
-0.9
N.D.
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+0.6
-2.3
-0.5
N.D.
m63_quarter_strength
M63_quarter_strength
+0.1
+0.5
-3.2
+0.3
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.2
+0.3
-2.3
-0.1
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+0.3
-1.9
-0.5
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.1
+0.1
-2.4
+0.2
N.D.
stress
SMSA with Ralstonia_antibiotic_mix
+0.0
+0.2
-2.7
+0.2
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
+0.7
-1.7
-0.7
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.3
+0.1
-2.8
+0.3
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.1
+0.8
-1.9
-1.1
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.1
+0.4
-2.2
-0.1
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.0
-0.2
-2.2
+0.4
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.1
+0.3
-2.4
+0.5
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.0
+0.7
-1.1
-1.2
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.4
-1.2
-1.0
N.D.
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+0.6
-1.7
+0.1
N.D.
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