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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS11120 and RALBFv3_RS11125 are separated by 101 nucleotides
RALBFv3_RS11125 and RALBFv3_RS11130 are separated by 263 nucleotides
RALBFv3_RS11130 and RALBFv3_RS11135 are separated by 116 nucleotides
RALBFv3_RS11135 and RALBFv3_RS11140 are separated by 29 nucleotides
RALBFv3_RS11120: RALBFv3_RS11120 - hypothetical protein, at 2,452,471 to 2,454,399
_RS11120
RALBFv3_RS11125: RALBFv3_RS11125 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 2,454,501 to 2,455,367
_RS11125
RALBFv3_RS11130: RALBFv3_RS11130 - GTPase, at 2,455,631 to 2,457,574
_RS11130
RALBFv3_RS11135: RALBFv3_RS11135 - A/G-specific adenine glycosylase, at 2,457,691 to 2,458,839
_RS11135
RALBFv3_RS11140: RALBFv3_RS11140 - ATP-dependent protease, at 2,458,869 to 2,459,522
_RS11140
Group
Condition
RALBFv3
_RS11120
RALBFv3
_RS11125
RALBFv3
_RS11130
RALBFv3
_RS11135
RALBFv3
_RS11140
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.3
-0.4
-3.3
-0.3
+0.1
cpg
CPG
-0.1
-0.1
-3.8
-0.0
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
-0.1
-4.1
-0.2
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.4
-3.4
-0.2
+0.0
cpg
CPG
-0.2
+0.0
-3.3
-0.4
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.0
-0.4
-3.4
-0.2
+0.4
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.5
+0.1
-2.7
-0.2
-0.4
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.5
+0.1
-3.2
+0.3
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-1.1
-0.3
-2.2
+0.1
+0.0
cpg
CPG
-0.1
-0.1
-2.9
-0.0
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.3
+0.3
-4.6
+0.4
+0.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.3
+0.0
-3.0
+0.4
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.9
-0.0
-2.2
+0.0
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.5
+0.1
-4.2
+0.3
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.9
-0.3
-1.7
-0.2
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.8
-0.1
-1.9
-0.0
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.9
+0.0
-2.4
+0.3
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.6
-0.2
-1.9
+0.0
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
+0.1
-3.8
+0.1
+0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.2
-0.0
-2.9
+0.2
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.7
-0.2
-1.8
+0.1
+0.1
in planta
tomato xylem local (total stem)
-0.2
-0.5
-0.8
-1.1
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-1.3
-0.2
-0.9
-0.1
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.4
-2.1
+0.1
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.3
+0.1
-1.8
+0.3
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
-0.1
-2.5
-0.4
+0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
-0.1
-2.4
-0.1
+0.7
in planta
tomato xylem local (total stem)
-0.0
+0.0
-1.6
-0.4
+0.6
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.9
-1.0
+0.5
-0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.5
+0.5
+2.1
-0.7
+0.7
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