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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS11045 and RALBFv3_RS11050 are separated by 3 nucleotides
RALBFv3_RS11050 and RALBFv3_RS11055 are separated by 205 nucleotides
RALBFv3_RS11055 and RALBFv3_RS11060 are separated by 60 nucleotides
RALBFv3_RS11060 and RALBFv3_RS11065 overlap by 1 nucleotides
RALBFv3_RS11045: RALBFv3_RS11045 - FAA hydrolase family protein, at 2,440,166 to 2,440,867
_RS11045
RALBFv3_RS11050: RALBFv3_RS11050 - maleylacetoacetate isomerase, at 2,440,871 to 2,441,521
_RS11050
RALBFv3_RS11055: RALBFv3_RS11055 - signal recognition particle-docking protein FtsY, at 2,441,727 to 2,442,860
_RS11055
RALBFv3_RS11060: RALBFv3_RS11060 - insulinase family protein, at 2,442,921 to 2,444,414
_RS11060
RALBFv3_RS11065: RALBFv3_RS11065 - insulinase family protein, at 2,444,414 to 2,445,757
_RS11065
Group
Condition
RALBFv3
_RS11045
RALBFv3
_RS11050
RALBFv3
_RS11055
RALBFv3
_RS11060
RALBFv3
_RS11065
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.2
-2.3
N.D.
-0.4
-0.9
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.2
-1.8
N.D.
-0.4
-0.8
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.1
-2.1
N.D.
-0.4
-0.4
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.4
-1.7
N.D.
-0.7
-0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.2
-0.1
N.D.
-1.3
-1.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.1
-1.8
N.D.
-0.6
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.2
-1.1
N.D.
-0.9
-0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.0
-0.3
N.D.
-1.4
-0.8
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.0
-1.3
N.D.
-0.3
-0.9
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.2
-1.7
N.D.
-0.2
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.1
-1.1
N.D.
-0.5
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.2
-0.9
N.D.
-0.4
-0.5
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.6
-0.8
N.D.
-0.0
-0.6
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.1
-1.6
N.D.
+0.0
-0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.4
-0.7
N.D.
-0.5
-0.2
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
-1.0
N.D.
-0.6
+0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.1
-0.6
N.D.
-0.7
-0.4
stress
SMSA with Ralstonia_antibiotic_mix
-0.4
-0.6
N.D.
-0.5
-0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.5
-1.1
N.D.
-0.5
-0.3
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.2
-1.4
N.D.
+0.3
-0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.2
-1.6
N.D.
+0.3
+0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
+0.0
-1.4
N.D.
-0.1
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.5
-1.0
N.D.
+0.6
+0.6
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.6
-0.2
N.D.
-0.5
+1.1
in planta
tomato xylem local (total stem)
-0.7
+0.3
N.D.
-0.1
+0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
+0.9
N.D.
-0.1
+0.4
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.6
+0.4
N.D.
+0.3
+0.8
in planta
tomato xylem local (total stem)
-0.3
+0.3
N.D.
+0.3
+0.8
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
+1.3
N.D.
-0.2
+0.4
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+0.6
N.D.
+0.2
+0.8
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RALBFv3_RS11055
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RALBFv3_RS11065
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