Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RALBFv3_RS10985	RALBFv3_RS10990	RALBFv3_RS10995	RALBFv3_RS11000	RALBFv3_RS11005
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-5.4	-3.6	-3.9	N.D.	-0.1
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-5.3	-4.2	-3.3	N.D.	+0.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-6.3	-3.7	-2.2	N.D.	+0.0
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-4.8	-3.6	-2.8	N.D.	+0.0
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-5.5	-3.9	-1.7	N.D.	+0.0
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-3.1	-3.9	-0.9	N.D.	+0.0
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-1.6	-3.3	-1.4	N.D.	-0.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-2.2	-2.3	-0.7	N.D.	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.4	-3.0	-0.6	N.D.	+0.2
in planta	Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi	-2.3	-1.6	-1.0	N.D.	+0.3
in planta	Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi	-2.7	-1.3	-0.7	N.D.	+0.1
cpg	CPG	-0.9	-3.5	-0.3	N.D.	+0.3
in planta	Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi	-2.2	-1.5	-0.5	N.D.	+0.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-1.0	-2.4	-0.6	N.D.	+0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	-0.9	-2.2	-0.6	N.D.	-0.0
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-1.8	-1.5	-0.4	N.D.	+0.1
in planta	Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.8	-1.0	-1.1	N.D.	+0.2
in planta	Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.7	-1.1	-0.6	N.D.	-0.3
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-1.0	-2.1	-1.0	N.D.	+0.4
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-1.2	-2.1	-0.3	N.D.	+0.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	-1.1	-2.2	-0.2	N.D.	+0.1
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.7	-2.3	-0.3	N.D.	-0.1
in planta	Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.6	-1.7	-0.8	N.D.	-0.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.1	-1.8	-0.4	N.D.	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-1.4	-1.5	-0.5	N.D.	+0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	-1.2	-1.5	-0.4	N.D.	+0.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.2	-2.2	-0.8	N.D.	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-1.2	-1.7	-0.2	N.D.	+0.1
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.6	-0.8	-0.8	N.D.	+0.2
smsa no antibiotic control	SMSA no antibiotic control	-1.7	-1.0	+0.3	N.D.	-0.1